同源/共线性证据

跨参考基因组查看同源关系与共线性区块证据。

证据边界:TK1151 和 OH-1004 是同一物种的不同材料,本页展示两个参考基因组之间的同源与共线性 ID 对照,不是同一品种/同一基因组版本升级。区块来自 DIAMOND RBH 与坐标顺序锚点,后续仍可用 MCScanX/JCVI 继续复核。也支持直接输入 JCVI_TKOH_ 开头的区块 ID。

全局区块概览

共线性区块
427
ID 对照记录
84884
高置信区块
302
中置信区块
125
参考材料组装基因数gap 数端粒扫描
TK1151 TK1151_GWHBCHF00000000 45224 1917 0/9
OH-1004 OH1004_GCA_047496595.1 40057 131 0/711

查询解析

输入 ID
JCVI_TKOH_00106
解析类型
区块 ID
ID 对照 + 共线性联合证据
解析到的基因
无
未能直接匹配到橡胶草基因目录
关联结果
0 / 1 / 45
对照 / 区块 / 锚点
最佳区块: JCVI_TKOH_00106

当前输入已解析为共线性区块 ID,下面优先展示区块范围和锚点基因。

线性共线性图

当前查询的最佳共线性区块以线性 ribbon 形式展示。

JCVI_TKOH_00106 Chr02 66122487-67815709 Chr06 92025766-93984396 mixed High 45 anchors
Chr02 66122487-67815709 Chr06 92025766-93984396 JCVI_TKOH_00106 · 45 gene pairs TkA02G259060 | LXL04_029563 | 99.1% | RBH_high_identity_coverage_local_synteny_minor_chr_pair | Probable TkA02G259240 | LXL04_029562 | 100.0% | sequence_supported_annotation_or_model_conflict | Review TkA02G260200 | LXL04_029560 | 100.0% | multi_source_to_OH1004 | Complex TkA02G260330 | LXL04_029559 | 95.3% | RBH_high_identity_coverage_local_synteny_minor_chr_pair | Probable TkA02G260340 | LXL04_029558 | 99.2% | multi_source_to_OH1004 | Complex TkA02G260430 | LXL04_029557 | 100.0% | RBH_high_identity_coverage_local_synteny_minor_chr_pair | Probable TkA02G260560 | LXL04_029556 | 99.1% | RBH_high_identity_coverage_local_synteny_minor_chr_pair | Probable TkA02G260680 | LXL04_029555 | 98.7% | sequence_supported_annotation_or_model_conflict | Review TkA02G261040 | LXL04_029551 | 99.4% | RBH_high_identity_coverage_local_synteny_minor_chr_pair | Probable TkA02G261250 | LXL04_029548 | 79.1% | RBH_below_probable_coverage_or_synteny_threshold | Review TkA02G261260 | LXL04_029547 | 99.6% | non_reciprocal_best_hit | Complex TkA02G261270 | LXL04_029546 | 96.1% | RBH_high_identity_coverage_local_synteny_minor_chr_pair | Probable
High Medium Other 仅绘制前 12 条锚点
锚点表按页展示,TSV 下载包含当前查询的全部锚点;上方 ribbon 仅展示当前区块的部分线性共线性骨架。

当前查询证据

当前查询没有可展示的 ID 对照记录。

共线性证据

区块查询位置目标位置方向当前映射锚点数置信等级备注
JCVI_TKOH_00106 Chr02:66122487-67815709 Chr06:92025766-93984396 mixed 45 高置信 Formal JCVI synteny block from rebuilt ID map pipeline.

区块锚点基因

锚点总数: 45 · 当前范围 1–45 · 页码 1/1

TkA02G259060 → LXL04_029563
99.1%
TkA02G259240 → LXL04_029562
100.0%
TkA02G260200 → LXL04_029560
100.0%
TkA02G260330 → LXL04_029559
95.3%
TkA02G260340 → LXL04_029558
99.2%
TkA02G260430 → LXL04_029557
100.0%
TkA02G260560 → LXL04_029556
99.1%
TkA02G260680 → LXL04_029555
98.7%
TkA02G261040 → LXL04_029551
99.4%
TkA02G261250 → LXL04_029548
79.1%
TkA02G261260 → LXL04_029547
99.6%
TkA02G261270 → LXL04_029546
96.1%
TK1151 基因OH-1004 基因区块一致性覆盖度置信等级
TkA02G259060LXL04_029563JCVI_TKOH_0010699.1100.0 / 100.0Probable
TkA02G259240LXL04_029562JCVI_TKOH_00106100.096.389 / 48.233待复核
TkA02G260200LXL04_029560JCVI_TKOH_00106100.0100.0 / 100.0Complex
TkA02G260330LXL04_029559JCVI_TKOH_0010695.391.034 / 91.973Probable
TkA02G260340LXL04_029558JCVI_TKOH_0010699.280.317 / 73.623Complex
TkA02G260430LXL04_029557JCVI_TKOH_00106100.0100.0 / 100.0Probable
TkA02G260560LXL04_029556JCVI_TKOH_0010699.1100.0 / 100.0Probable
TkA02G260680LXL04_029555JCVI_TKOH_0010698.7100.0 / 100.0待复核
TkA02G261040LXL04_029551JCVI_TKOH_0010699.4100.0 / 100.0Probable
TkA02G261250LXL04_029548JCVI_TKOH_0010679.199.153 / 49.672待复核
TkA02G261260LXL04_029547JCVI_TKOH_0010699.6100.0 / 65.242Complex
TkA02G261270LXL04_029546JCVI_TKOH_0010696.1100.0 / 84.536Probable
TkA02G261280LXL04_029545JCVI_TKOH_0010691.7100.0 / 54.242待复核
TkA02G261290LXL04_029546JCVI_TKOH_0010683.996.622 / 29.485Complex
TkA02G261520LXL04_029541JCVI_TKOH_00106100.0100.0 / 76.259Probable
TkA02G261550LXL04_029539JCVI_TKOH_0010690.7100.0 / 100.0Probable
TkA02G261560LXL04_029538JCVI_TKOH_0010698.5100.0 / 100.0Probable
TkA02G261600LXL04_029537JCVI_TKOH_0010698.7100.0 / 100.0Probable
TkA02G261820LXL04_029531JCVI_TKOH_0010695.3100.0 / 100.0Complex
TkA02G262160LXL04_029529JCVI_TKOH_0010683.283.209 / 72.34Complex
TkA02G262410LXL04_029526JCVI_TKOH_0010699.4100.0 / 100.0Complex
TkA02G262470LXL04_029525JCVI_TKOH_0010698.280.292 / 29.73待复核
TkA02G262760LXL04_029521JCVI_TKOH_0010697.789.773 / 85.683Complex
TkA02G263140LXL04_029520JCVI_TKOH_00106100.0100.0 / 100.0待复核
TkA02G263150LXL04_029519JCVI_TKOH_0010678.7100.0 / 100.0Complex
TkA02G263260LXL04_029518JCVI_TKOH_00106100.0100.0 / 100.0待复核
TkA02G263450LXL04_029517JCVI_TKOH_0010698.7100.0 / 100.0Complex
TkA02G263530LXL04_029515JCVI_TKOH_00106100.0100.0 / 100.0Complex
TkA02G263540LXL04_029513JCVI_TKOH_00106100.0100.0 / 100.0待复核
TkA02G263550LXL04_029512JCVI_TKOH_0010699.399.815 / 93.588Probable
TkA02G263700LXL04_029511JCVI_TKOH_0010699.8100.0 / 100.0Complex
TkA02G263710LXL04_029510JCVI_TKOH_0010691.0100.0 / 100.0待复核
TkA02G263760LXL04_029509JCVI_TKOH_00106100.0100.0 / 81.003Probable
TkA02G263770LXL04_029508JCVI_TKOH_0010699.8100.0 / 100.0Probable
TkA02G263840LXL04_029507JCVI_TKOH_0010699.7100.0 / 100.0Probable
TkA02G263950LXL04_029506JCVI_TKOH_00106100.046.528 / 26.693待复核
TkA02G264160LXL04_029503JCVI_TKOH_0010699.496.25 / 90.588待复核
TkA02G264200LXL04_029502JCVI_TKOH_0010695.6100.0 / 100.0Complex
TkA02G264230LXL04_029501JCVI_TKOH_0010699.9100.0 / 94.02Complex
TkA02G264340LXL04_029500JCVI_TKOH_0010699.9100.0 / 100.0Complex
TkA02G264690LXL04_029499JCVI_TKOH_00106100.0100.0 / 100.0Complex
TkA02G264710LXL04_029498JCVI_TKOH_0010699.2100.0 / 100.0Complex
TkA02G264720LXL04_029497JCVI_TKOH_0010698.5100.0 / 36.496待复核
TkA02G264730LXL04_029497JCVI_TKOH_00106100.099.682 / 57.117待复核
TkA02G264760LXL04_029496JCVI_TKOH_0010699.6100.0 / 100.0Complex