record_type input_id synteny_block_id query_reference target_reference query_gene target_gene query_chr query_start query_end target_chr target_start target_end gene_pair_count identity query_coverage target_coverage reciprocal_best_hit relationship_type confidence orientation note evidence_summary source_table block_summary JCVI_TKOH_00106 JCVI_TKOH_00106 TK1151 OH1004 Chr02 66122487 67815709 Chr06 92025766 93984396 45 High mixed Formal JCVI synteny block from rebuilt ID map pipeline. Formal JCVI synteny block from rebuilt ID map pipeline. synteny_block block_anchor JCVI_TKOH_00106 JCVI_TKOH_00106 TK1151 OH1004 TkA02G259060 LXL04_029563 Chr02 66122487 66129931 Chr06 93977732 93984396 99.1 100.0 100.0 1 RBH_high_identity_coverage_local_synteny_minor_chr_pair Probable category=probable_1to1; chr_pair=minor_or_translocated_chromosome_pair; RBH=1; protein_identity=99.100; qcov=100.000; tcov=100.000; CDS_RBH=1; JCVI=JCVI_TKOH_00106 id_converter_ready block_anchor JCVI_TKOH_00106 JCVI_TKOH_00106 TK1151 OH1004 TkA02G259240 LXL04_029562 Chr02 66161363 66167579 Chr06 93933567 93939539 100.0 96.389 48.233 0 sequence_supported_annotation_or_model_conflict Review category=annotation_conflict; chr_pair=minor_or_translocated_chromosome_pair; RBH=0; protein_identity=100.000; qcov=96.389; tcov=48.233; CDS_RBH=0; JCVI=JCVI_TKOH_00106 id_converter_ready block_anchor JCVI_TKOH_00106 JCVI_TKOH_00106 TK1151 OH1004 TkA02G260200 LXL04_029560 Chr02 66369409 66371984 Chr06 93771764 93773930 100.0 100.0 100.0 1 multi_source_to_OH1004 Complex category=many_to_one; chr_pair=minor_or_translocated_chromosome_pair; RBH=1; protein_identity=100.000; qcov=100.000; tcov=100.000; CDS_RBH=1; JCVI=JCVI_TKOH_00106 id_converter_ready block_anchor JCVI_TKOH_00106 JCVI_TKOH_00106 TK1151 OH1004 TkA02G260330 LXL04_029559 Chr02 66403237 66404109 Chr06 93740363 93741262 95.3 91.034 91.973 1 RBH_high_identity_coverage_local_synteny_minor_chr_pair Probable category=probable_1to1; chr_pair=minor_or_translocated_chromosome_pair; RBH=1; protein_identity=95.300; qcov=91.034; tcov=91.973; CDS_RBH=1; JCVI=JCVI_TKOH_00106 id_converter_ready block_anchor JCVI_TKOH_00106 JCVI_TKOH_00106 TK1151 OH1004 TkA02G260340 LXL04_029558 Chr02 66407319 66409934 Chr06 93722304 93724681 99.2 80.317 73.623 1 multi_source_to_OH1004 Complex category=many_to_one; chr_pair=minor_or_translocated_chromosome_pair; RBH=1; protein_identity=99.200; qcov=80.317; tcov=73.623; CDS_RBH=1; JCVI=JCVI_TKOH_00106 id_converter_ready block_anchor JCVI_TKOH_00106 JCVI_TKOH_00106 TK1151 OH1004 TkA02G260430 LXL04_029557 Chr02 66429981 66432431 Chr06 93687244 93689522 100.0 100.0 100.0 1 RBH_high_identity_coverage_local_synteny_minor_chr_pair Probable category=probable_1to1; chr_pair=minor_or_translocated_chromosome_pair; RBH=1; protein_identity=100.000; qcov=100.000; tcov=100.000; CDS_RBH=1; JCVI=JCVI_TKOH_00106 id_converter_ready block_anchor JCVI_TKOH_00106 JCVI_TKOH_00106 TK1151 OH1004 TkA02G260560 LXL04_029556 Chr02 66464251 66464675 Chr06 93654834 93655470 99.1 100.0 100.0 1 RBH_high_identity_coverage_local_synteny_minor_chr_pair Probable category=probable_1to1; chr_pair=minor_or_translocated_chromosome_pair; RBH=1; protein_identity=99.100; qcov=100.000; tcov=100.000; CDS_RBH=1; JCVI=JCVI_TKOH_00106 id_converter_ready block_anchor JCVI_TKOH_00106 JCVI_TKOH_00106 TK1151 OH1004 TkA02G260680 LXL04_029555 Chr02 66488072 66488527 Chr06 93641649 93642104 98.7 100.0 100.0 1 sequence_supported_annotation_or_model_conflict Review category=annotation_conflict; chr_pair=minor_or_translocated_chromosome_pair; RBH=1; protein_identity=98.700; qcov=100.000; tcov=100.000; CDS_RBH=1; JCVI=JCVI_TKOH_00106 id_converter_ready block_anchor JCVI_TKOH_00106 JCVI_TKOH_00106 TK1151 OH1004 TkA02G261040 LXL04_029551 Chr02 66581232 66582761 Chr06 93573793 93574755 99.4 100.0 100.0 1 RBH_high_identity_coverage_local_synteny_minor_chr_pair Probable category=probable_1to1; chr_pair=minor_or_translocated_chromosome_pair; RBH=1; protein_identity=99.400; qcov=100.000; tcov=100.000; CDS_RBH=1; JCVI=JCVI_TKOH_00106 id_converter_ready block_anchor JCVI_TKOH_00106 JCVI_TKOH_00106 TK1151 OH1004 TkA02G261250 LXL04_029548 Chr02 66660515 66662504 Chr06 93522820 93524298 79.1 99.153 49.672 1 RBH_below_probable_coverage_or_synteny_threshold Review category=annotation_conflict; chr_pair=minor_or_translocated_chromosome_pair; RBH=1; protein_identity=79.100; qcov=99.153; tcov=49.672; CDS_RBH=1; JCVI=JCVI_TKOH_00106 id_converter_ready block_anchor JCVI_TKOH_00106 JCVI_TKOH_00106 TK1151 OH1004 TkA02G261260 LXL04_029547 Chr02 66663792 66667471 Chr06 93518885 93521791 99.6 100.0 65.242 0 non_reciprocal_best_hit Complex category=many_to_one; chr_pair=minor_or_translocated_chromosome_pair; RBH=0; protein_identity=99.600; qcov=100.000; tcov=65.242; CDS_RBH=1; JCVI=JCVI_TKOH_00106 id_converter_ready block_anchor JCVI_TKOH_00106 JCVI_TKOH_00106 TK1151 OH1004 TkA02G261270 LXL04_029546 Chr02 66669246 66670733 Chr06 93515079 93516536 96.1 100.0 84.536 1 RBH_high_identity_coverage_local_synteny_minor_chr_pair Probable category=probable_1to1; chr_pair=minor_or_translocated_chromosome_pair; RBH=1; protein_identity=96.100; qcov=100.000; tcov=84.536; CDS_RBH=1; JCVI=JCVI_TKOH_00106 id_converter_ready block_anchor JCVI_TKOH_00106 JCVI_TKOH_00106 TK1151 OH1004 TkA02G261280 LXL04_029545 Chr02 66671235 66679473 Chr06 93513636 93514805 91.7 100.0 54.242 1 RBH_below_probable_coverage_or_synteny_threshold Review category=annotation_conflict; chr_pair=minor_or_translocated_chromosome_pair; RBH=1; protein_identity=91.700; qcov=100.000; tcov=54.242; CDS_RBH=1; JCVI=JCVI_TKOH_00106 id_converter_ready block_anchor JCVI_TKOH_00106 JCVI_TKOH_00106 TK1151 OH1004 TkA02G261290 LXL04_029546 Chr02 66684266 66684712 Chr06 93515079 93516536 83.9 96.622 29.485 0 non_reciprocal_best_hit Complex category=many_to_one; chr_pair=minor_or_translocated_chromosome_pair; RBH=0; protein_identity=83.900; qcov=96.622; tcov=29.485; CDS_RBH=0; JCVI=JCVI_TKOH_00106 id_converter_ready block_anchor JCVI_TKOH_00106 JCVI_TKOH_00106 TK1151 OH1004 TkA02G261520 LXL04_029541 Chr02 66761392 66761712 Chr06 93444488 93444907 100.0 100.0 76.259 1 RBH_sequence_supported Probable category=probable_1to1; chr_pair=minor_or_translocated_chromosome_pair; RBH=1; protein_identity=100.000; qcov=100.000; tcov=76.259; CDS_RBH=1; JCVI=JCVI_TKOH_00106 id_converter_ready block_anchor JCVI_TKOH_00106 JCVI_TKOH_00106 TK1151 OH1004 TkA02G261550 LXL04_029539 Chr02 66780183 66783182 Chr06 93433504 93435180 90.7 100.0 100.0 1 RBH_sequence_supported Probable category=probable_1to1; chr_pair=minor_or_translocated_chromosome_pair; RBH=1; protein_identity=90.700; qcov=100.000; tcov=100.000; CDS_RBH=1; JCVI=JCVI_TKOH_00106 id_converter_ready block_anchor JCVI_TKOH_00106 JCVI_TKOH_00106 TK1151 OH1004 TkA02G261560 LXL04_029538 Chr02 66782122 66783748 Chr06 93431867 93433281 98.5 100.0 100.0 1 RBH_high_identity_coverage_local_synteny_minor_chr_pair Probable category=probable_1to1; chr_pair=minor_or_translocated_chromosome_pair; RBH=1; protein_identity=98.500; qcov=100.000; tcov=100.000; CDS_RBH=1; JCVI=JCVI_TKOH_00106 id_converter_ready block_anchor JCVI_TKOH_00106 JCVI_TKOH_00106 TK1151 OH1004 TkA02G261600 LXL04_029537 Chr02 66800247 66801769 Chr06 93408731 93410085 98.7 100.0 100.0 1 RBH_high_identity_coverage_local_synteny_minor_chr_pair Probable category=probable_1to1; chr_pair=minor_or_translocated_chromosome_pair; RBH=1; protein_identity=98.700; qcov=100.000; tcov=100.000; CDS_RBH=1; JCVI=JCVI_TKOH_00106 id_converter_ready block_anchor JCVI_TKOH_00106 JCVI_TKOH_00106 TK1151 OH1004 TkA02G261820 LXL04_029531 Chr02 67018950 67019717 Chr06 93181217 93181984 95.3 100.0 100.0 1 multi_source_to_OH1004 Complex category=many_to_one; chr_pair=minor_or_translocated_chromosome_pair; RBH=1; protein_identity=95.300; qcov=100.000; tcov=100.000; CDS_RBH=1; JCVI=JCVI_TKOH_00106 id_converter_ready block_anchor JCVI_TKOH_00106 JCVI_TKOH_00106 TK1151 OH1004 TkA02G262160 LXL04_029529 Chr02 67091635 67094295 Chr06 93103105 93105709 83.2 83.209 72.34 0 multi_source_to_OH1004 Complex category=many_to_one; chr_pair=minor_or_translocated_chromosome_pair; RBH=0; protein_identity=83.200; qcov=83.209; tcov=72.340; CDS_RBH=1; JCVI=JCVI_TKOH_00106 id_converter_ready block_anchor JCVI_TKOH_00106 JCVI_TKOH_00106 TK1151 OH1004 TkA02G262410 LXL04_029526 Chr02 67174404 67178991 Chr06 93008698 93012878 99.4 100.0 100.0 0 multi_source_to_OH1004 Complex category=many_to_one; chr_pair=minor_or_translocated_chromosome_pair; RBH=0; protein_identity=99.400; qcov=100.000; tcov=100.000; CDS_RBH=1; JCVI=JCVI_TKOH_00106 id_converter_ready block_anchor JCVI_TKOH_00106 JCVI_TKOH_00106 TK1151 OH1004 TkA02G262470 LXL04_029525 Chr02 67208157 67210143 Chr06 92979017 92991370 98.2 80.292 29.73 1 RBH_below_probable_coverage_or_synteny_threshold Review category=annotation_conflict; chr_pair=minor_or_translocated_chromosome_pair; RBH=1; protein_identity=98.200; qcov=80.292; tcov=29.730; CDS_RBH=1; JCVI=JCVI_TKOH_00106 id_converter_ready block_anchor JCVI_TKOH_00106 JCVI_TKOH_00106 TK1151 OH1004 TkA02G262760 LXL04_029521 Chr02 67284523 67288352 Chr06 92890754 92893034 97.7 89.773 85.683 1 multi_source_to_OH1004 Complex category=many_to_one; chr_pair=minor_or_translocated_chromosome_pair; RBH=1; protein_identity=97.700; qcov=89.773; tcov=85.683; CDS_RBH=1; JCVI=JCVI_TKOH_00106 id_converter_ready block_anchor JCVI_TKOH_00106 JCVI_TKOH_00106 TK1151 OH1004 TkA02G263140 LXL04_029520 Chr02 67357601 67357924 Chr06 92819304 92819627 100.0 100.0 100.0 1 sequence_supported_annotation_or_model_conflict Review category=annotation_conflict; chr_pair=minor_or_translocated_chromosome_pair; RBH=1; protein_identity=100.000; qcov=100.000; tcov=100.000; CDS_RBH=1; JCVI=JCVI_TKOH_00106 id_converter_ready block_anchor JCVI_TKOH_00106 JCVI_TKOH_00106 TK1151 OH1004 TkA02G263150 LXL04_029519 Chr02 67364695 67367239 Chr06 92809989 92812533 78.7 100.0 100.0 1 multi_source_to_OH1004 Complex category=many_to_one; chr_pair=minor_or_translocated_chromosome_pair; RBH=1; protein_identity=78.700; qcov=100.000; tcov=100.000; CDS_RBH=1; JCVI=JCVI_TKOH_00106 id_converter_ready block_anchor JCVI_TKOH_00106 JCVI_TKOH_00106 TK1151 OH1004 TkA02G263260 LXL04_029518 Chr02 67389168 67390651 Chr06 92787040 92788006 100.0 100.0 100.0 1 sequence_supported_annotation_or_model_conflict Review category=annotation_conflict; chr_pair=minor_or_translocated_chromosome_pair; RBH=1; protein_identity=100.000; qcov=100.000; tcov=100.000; CDS_RBH=1; JCVI=JCVI_TKOH_00106 id_converter_ready block_anchor JCVI_TKOH_00106 JCVI_TKOH_00106 TK1151 OH1004 TkA02G263450 LXL04_029517 Chr02 67423415 67425602 Chr06 92754075 92755839 98.7 100.0 100.0 1 multi_source_to_OH1004 Complex category=many_to_one; chr_pair=minor_or_translocated_chromosome_pair; RBH=1; protein_identity=98.700; qcov=100.000; tcov=100.000; CDS_RBH=1; JCVI=JCVI_TKOH_00106 id_converter_ready block_anchor JCVI_TKOH_00106 JCVI_TKOH_00106 TK1151 OH1004 TkA02G263530 LXL04_029515 Chr02 67448893 67452770 Chr06 92683439 92685652 100.0 100.0 100.0 1 multi_source_to_OH1004 Complex category=many_to_one; chr_pair=minor_or_translocated_chromosome_pair; RBH=1; protein_identity=100.000; qcov=100.000; tcov=100.000; CDS_RBH=1; JCVI=JCVI_TKOH_00106 id_converter_ready block_anchor JCVI_TKOH_00106 JCVI_TKOH_00106 TK1151 OH1004 TkA02G263540 LXL04_029513 Chr02 67454837 67455504 Chr06 92679587 92680254 100.0 100.0 100.0 1 sequence_supported_annotation_or_model_conflict Review category=annotation_conflict; chr_pair=minor_or_translocated_chromosome_pair; RBH=1; protein_identity=100.000; qcov=100.000; tcov=100.000; CDS_RBH=1; JCVI=JCVI_TKOH_00106 id_converter_ready block_anchor JCVI_TKOH_00106 JCVI_TKOH_00106 TK1151 OH1004 TkA02G263550 LXL04_029512 Chr02 67456751 67459552 Chr06 92676311 92679211 99.3 99.815 93.588 1 RBH_high_identity_coverage_local_synteny_minor_chr_pair Probable category=probable_1to1; chr_pair=minor_or_translocated_chromosome_pair; RBH=1; protein_identity=99.300; qcov=99.815; tcov=93.588; CDS_RBH=1; JCVI=JCVI_TKOH_00106 id_converter_ready block_anchor JCVI_TKOH_00106 JCVI_TKOH_00106 TK1151 OH1004 TkA02G263700 LXL04_029511 Chr02 67499020 67501647 Chr06 92657281 92659162 99.8 100.0 100.0 1 multi_source_to_OH1004 Complex category=many_to_one; chr_pair=minor_or_translocated_chromosome_pair; RBH=1; protein_identity=99.800; qcov=100.000; tcov=100.000; CDS_RBH=1; JCVI=JCVI_TKOH_00106 id_converter_ready block_anchor JCVI_TKOH_00106 JCVI_TKOH_00106 TK1151 OH1004 TkA02G263710 LXL04_029510 Chr02 67500356 67507914 Chr06 92655424 92657042 91.0 100.0 100.0 1 RBH_below_probable_coverage_or_synteny_threshold Review category=annotation_conflict; chr_pair=minor_or_translocated_chromosome_pair; RBH=1; protein_identity=91.000; qcov=100.000; tcov=100.000; CDS_RBH=0; JCVI=JCVI_TKOH_00106 id_converter_ready block_anchor JCVI_TKOH_00106 JCVI_TKOH_00106 TK1151 OH1004 TkA02G263760 LXL04_029509 Chr02 67518230 67524194 Chr06 92648667 92652906 100.0 100.0 81.003 1 RBH_high_identity_coverage_local_synteny_minor_chr_pair Probable category=probable_1to1; chr_pair=minor_or_translocated_chromosome_pair; RBH=1; protein_identity=100.000; qcov=100.000; tcov=81.003; CDS_RBH=1; JCVI=JCVI_TKOH_00106 id_converter_ready block_anchor JCVI_TKOH_00106 JCVI_TKOH_00106 TK1151 OH1004 TkA02G263770 LXL04_029508 Chr02 67524952 67527680 Chr06 92645118 92647555 99.8 100.0 100.0 1 RBH_high_identity_coverage_local_synteny_minor_chr_pair Probable category=probable_1to1; chr_pair=minor_or_translocated_chromosome_pair; RBH=1; protein_identity=99.800; qcov=100.000; tcov=100.000; CDS_RBH=1; JCVI=JCVI_TKOH_00106 id_converter_ready block_anchor JCVI_TKOH_00106 JCVI_TKOH_00106 TK1151 OH1004 TkA02G263840 LXL04_029507 Chr02 67546984 67549211 Chr06 92626621 92627896 99.7 100.0 100.0 1 RBH_high_identity_coverage_local_synteny_minor_chr_pair Probable category=probable_1to1; chr_pair=minor_or_translocated_chromosome_pair; RBH=1; protein_identity=99.700; qcov=100.000; tcov=100.000; CDS_RBH=1; JCVI=JCVI_TKOH_00106 id_converter_ready block_anchor JCVI_TKOH_00106 JCVI_TKOH_00106 TK1151 OH1004 TkA02G263950 LXL04_029506 Chr02 67571942 67573780 Chr06 92587534 92590951 100.0 46.528 26.693 1 RBH_below_probable_coverage_or_synteny_threshold Review category=annotation_conflict; chr_pair=minor_or_translocated_chromosome_pair; RBH=1; protein_identity=100.000; qcov=46.528; tcov=26.693; CDS_RBH=1; JCVI=JCVI_TKOH_00106 id_converter_ready block_anchor JCVI_TKOH_00106 JCVI_TKOH_00106 TK1151 OH1004 TkA02G264160 LXL04_029503 Chr02 67635704 67636817 Chr06 92514582 92515491 99.4 96.25 90.588 0 sequence_supported_annotation_or_model_conflict Review category=annotation_conflict; chr_pair=minor_or_translocated_chromosome_pair; RBH=0; protein_identity=99.400; qcov=96.250; tcov=90.588; CDS_RBH=0; JCVI=JCVI_TKOH_00106 id_converter_ready block_anchor JCVI_TKOH_00106 JCVI_TKOH_00106 TK1151 OH1004 TkA02G264200 LXL04_029502 Chr02 67659817 67664541 Chr06 92463885 92467891 95.6 100.0 100.0 0 multi_source_to_OH1004 Complex category=many_to_one; chr_pair=minor_or_translocated_chromosome_pair; RBH=0; protein_identity=95.600; qcov=100.000; tcov=100.000; CDS_RBH=1; JCVI=JCVI_TKOH_00106 id_converter_ready block_anchor JCVI_TKOH_00106 JCVI_TKOH_00106 TK1151 OH1004 TkA02G264230 LXL04_029501 Chr02 67669175 67673771 Chr06 92454573 92459502 99.9 100.0 94.02 1 multi_source_to_OH1004 Complex category=many_to_one; chr_pair=minor_or_translocated_chromosome_pair; RBH=1; protein_identity=99.900; qcov=100.000; tcov=94.020; CDS_RBH=1; JCVI=JCVI_TKOH_00106 id_converter_ready block_anchor JCVI_TKOH_00106 JCVI_TKOH_00106 TK1151 OH1004 TkA02G264340 LXL04_029500 Chr02 67695981 67703793 Chr06 92424494 92432098 99.9 100.0 100.0 1 multi_source_to_OH1004 Complex category=many_to_one; chr_pair=minor_or_translocated_chromosome_pair; RBH=1; protein_identity=99.900; qcov=100.000; tcov=100.000; CDS_RBH=1; JCVI=JCVI_TKOH_00106 id_converter_ready block_anchor JCVI_TKOH_00106 JCVI_TKOH_00106 TK1151 OH1004 TkA02G264690 LXL04_029499 Chr02 67783669 67784945 Chr06 92395118 92396088 100.0 100.0 100.0 1 multi_source_to_OH1004 Complex category=many_to_one; chr_pair=minor_or_translocated_chromosome_pair; RBH=1; protein_identity=100.000; qcov=100.000; tcov=100.000; CDS_RBH=1; JCVI=JCVI_TKOH_00106 id_converter_ready block_anchor JCVI_TKOH_00106 JCVI_TKOH_00106 TK1151 OH1004 TkA02G264710 LXL04_029498 Chr02 67793997 67795542 Chr06 92384633 92385909 99.2 100.0 100.0 0 multi_source_to_OH1004 Complex category=many_to_one; chr_pair=minor_or_translocated_chromosome_pair; RBH=0; protein_identity=99.200; qcov=100.000; tcov=100.000; CDS_RBH=0; JCVI=JCVI_TKOH_00106 id_converter_ready block_anchor JCVI_TKOH_00106 JCVI_TKOH_00106 TK1151 OH1004 TkA02G264720 LXL04_029497 Chr02 67795365 67796255 Chr06 92376818 92384565 98.5 100.0 36.496 0 sequence_supported_annotation_or_model_conflict Review category=annotation_conflict; chr_pair=minor_or_translocated_chromosome_pair; RBH=0; protein_identity=98.500; qcov=100.000; tcov=36.496; CDS_RBH=0; JCVI=JCVI_TKOH_00106 id_converter_ready block_anchor JCVI_TKOH_00106 JCVI_TKOH_00106 TK1151 OH1004 TkA02G264730 LXL04_029497 Chr02 67796295 67800464 Chr06 92376818 92384565 100.0 99.682 57.117 1 sequence_supported_annotation_or_model_conflict Review category=annotation_conflict; chr_pair=minor_or_translocated_chromosome_pair; RBH=1; protein_identity=100.000; qcov=99.682; tcov=57.117; CDS_RBH=1; JCVI=JCVI_TKOH_00106 id_converter_ready block_anchor JCVI_TKOH_00106 JCVI_TKOH_00106 TK1151 OH1004 TkA02G264760 LXL04_029496 Chr02 67811776 67815709 Chr06 92365816 92369395 99.6 100.0 100.0 1 multi_source_to_OH1004 Complex category=many_to_one; chr_pair=minor_or_translocated_chromosome_pair; RBH=1; protein_identity=99.600; qcov=100.000; tcov=100.000; CDS_RBH=0; JCVI=JCVI_TKOH_00106 id_converter_ready