Orthology / Synteny Evidence

Inspect cross-reference orthology and synteny-block evidence.

TkA01G624900 LXL04_000258 JCVI_TKOH_00001 Gene ID Converter

Evidence boundary: TK1151 and OH-1004 are different materials of the same species. This page shows ortholog and synteny ID correspondence between two reference genomes, not a same-cultivar genome-version upgrade. Blocks are based on DIAMOND RBH plus coordinate-order anchors and can be further refined by MCScanX/JCVI. JCVI_TKOH_ block IDs are also accepted.

Global Block Summary

Synteny blocks

427

ID converter records

84884

High confidence

302

Medium confidence

125

Material	Assembly	Genes	Gap runs	Telomere scan
TK1151	`TK1151_GWHBCHF00000000`	45224	1917	0/9
OH-1004	`OH1004_GCA_047496595.1`	40057	131	0/711

Query Interpretation

Input ID

JCVI_TKOH_00036

Query type

Block ID

Crosswalk plus synteny evidence

Resolved gene

None

No rubber dandelion gene was resolved

Linked evidence

0 / 1 / 714

crosswalk / blocks / anchors

Best block: JCVI_TKOH_00036

The query resolves to a synteny-block ID. Block span and anchor genes are shown first.

Gene ID Converter Download current result

Linear Synteny View

The best synteny block for the current query is shown as a linear ribbon.

JCVI_TKOH_00036 Chr01 123381654-146487023 Chr01 15246434-38351657 mixed High 114 anchors

High Medium Other Only the first 12 anchors are drawn

The anchor table is paginated; TSV contains all anchors for the current query. The ribbon shows only a partial linear backbone of the current block.

Current Query Evidence

No ID correspondence record is available for the current query.

Synteny Evidence

Block	Query location	Target location	Orientation	Current mapped anchors	Confidence	Note
`JCVI_TKOH_00036`	Chr01:123381654-146487023	Chr01:15246434-38351657	mixed	714	High	Formal JCVI synteny block from rebuilt ID map pipeline.

Block Anchor Genes

Total anchors: 714 · Showing 601–714 · Page 4/4

Previous Download All Anchors TSV

TkA01G566180 → LXL04_001025

98.6%

TkA01G566290 → LXL04_001024

95.5%

TkA01G566390 → LXL04_001021

92.0%

TkA01G566490 → LXL04_001019

98.0%

TkA01G566540 → LXL04_001017

96.8%

TkA01G566840 → LXL04_001012

98.1%

TkA01G566960 → LXL04_001011

99.5%

TkA01G566980 → LXL04_001010

82.0%

TkA01G567290 → LXL04_001006

94.6%

TkA01G567330 → LXL04_001005

99.5%

TkA01G567340 → LXL04_001003

100.0%

TkA01G567400 → LXL04_001003

68.5%

TK1151 gene	OH-1004 gene	Block	Identity	Coverage	Confidence
`TkA01G566180`	`LXL04_001025`	`JCVI_TKOH_00036`	98.6	100.0 / 97.651	Strict
`TkA01G566290`	`LXL04_001024`	`JCVI_TKOH_00036`	95.5	100.0 / 100.0	Strict
`TkA01G566390`	`LXL04_001021`	`JCVI_TKOH_00036`	92.0	100.0 / 100.0	Probable
`TkA01G566490`	`LXL04_001019`	`JCVI_TKOH_00036`	98.0	100.0 / 100.0	Complex
`TkA01G566540`	`LXL04_001017`	`JCVI_TKOH_00036`	96.8	95.122 / 31.869	Review
`TkA01G566840`	`LXL04_001012`	`JCVI_TKOH_00036`	98.1	100.0 / 80.217	Strict
`TkA01G566960`	`LXL04_001011`	`JCVI_TKOH_00036`	99.5	100.0 / 35.248	Review
`TkA01G566980`	`LXL04_001010`	`JCVI_TKOH_00036`	82.0	97.579 / 66.845	Complex
`TkA01G567290`	`LXL04_001006`	`JCVI_TKOH_00036`	94.6	100.0 / 95.783	Probable
`TkA01G567330`	`LXL04_001005`	`JCVI_TKOH_00036`	99.5	100.0 / 100.0	Strict
`TkA01G567340`	`LXL04_001003`	`JCVI_TKOH_00036`	100.0	100.0 / 100.0	Review
`TkA01G567400`	`LXL04_001003`	`JCVI_TKOH_00036`	68.5	92.593 / 83.389	Complex
`TkA01G567640`	`LXL04_001003`	`JCVI_TKOH_00036`	79.3	100.0 / 63.455	Complex
`TkA01G568790`	`LXL04_000997`	`JCVI_TKOH_00036`	98.1	100.0 / 100.0	Strict
`TkA01G568870`	`LXL04_000996`	`JCVI_TKOH_00036`	88.7	100.0 / 100.0	Review
`TkA01G568930`	`LXL04_000995`	`JCVI_TKOH_00036`	100.0	100.0 / 100.0	Review
`TkA01G569120`	`LXL04_000992`	`JCVI_TKOH_00036`	98.4	100.0 / 76.604	Probable
`TkA01G569130`	`LXL04_000991`	`JCVI_TKOH_00036`	99.4	100.0 / 100.0	Strict
`TkA01G569140`	`LXL04_000990`	`JCVI_TKOH_00036`	88.3	100.0 / 100.0	Review
`TkA01G569150`	`LXL04_000988`	`JCVI_TKOH_00036`	99.0	100.0 / 100.0	Strict
`TkA01G569170`	`LXL04_000986`	`JCVI_TKOH_00036`	96.8	94.444 / 96.857	Strict
`TkA01G569340`	`LXL04_000983`	`JCVI_TKOH_00036`	99.0	100.0 / 100.0	Strict
`TkA01G569350`	`LXL04_000982`	`JCVI_TKOH_00036`	100.0	87.709 / 96.914	Strict
`TkA01G569360`	`LXL04_000981`	`JCVI_TKOH_00036`	100.0	76.692 / 100.0	Complex
`TkA01G569640`	`LXL04_000975`	`JCVI_TKOH_00036`	99.0	100.0 / 100.0	Complex
`TkA01G569650`	`LXL04_000974`	`JCVI_TKOH_00036`	97.0	95.876 / 96.055	Complex
`TkA01G569660`	`LXL04_000973`	`JCVI_TKOH_00036`	100.0	61.538 / 53.782	Complex
`TkA01G569780`	`LXL04_000971`	`JCVI_TKOH_00036`	94.9	100.0 / 100.0	Review
`TkA01G570420`	`LXL04_000975`	`JCVI_TKOH_00036`	100.0	100.0 / 100.0	Complex
`TkA01G570430`	`LXL04_000974`	`JCVI_TKOH_00036`	99.6	95.89 / 96.055	Complex
`TkA01G570440`	`LXL04_000973`	`JCVI_TKOH_00036`	100.0	61.538 / 53.782	Complex
`TkA01G570890`	`LXL04_000971`	`JCVI_TKOH_00036`	100.0	100.0 / 55.466	Review
`TkA01G571760`	`LXL04_000962`	`JCVI_TKOH_00036`	78.5	100.0 / 100.0	Review
`TkA01G571870`	`LXL04_000961`	`JCVI_TKOH_00036`	98.7	100.0 / 100.0	Strict
`TkA01G571910`	`LXL04_000959`	`JCVI_TKOH_00036`	96.0	99.425 / 96.648	Strict
`TkA01G572580`	`LXL04_000957`	`JCVI_TKOH_00036`	90.0	98.367 / 37.175	Complex
`TkA01G572590`	`LXL04_000956`	`JCVI_TKOH_00036`	79.2	92.937 / 51.618	Complex
`TkA01G572600`	`LXL04_000956`	`JCVI_TKOH_00036`	98.6	61.947 / 11.925	Complex
`TkA01G572650`	`LXL04_000954`	`JCVI_TKOH_00036`	100.0	91.124 / 44.509	Review
`TkA01G572720`	`LXL04_000953`	`JCVI_TKOH_00036`	89.4	100.0 / 100.0	Review
`TkA01G572980`	`LXL04_000950`	`JCVI_TKOH_00036`	85.7	100.0 / 100.0	Review
`TkA01G573240`	`LXL04_000949`	`JCVI_TKOH_00036`	100.0	100.0 / 89.508	Strict
`TkA01G574710`	`LXL04_000947`	`JCVI_TKOH_00036`	99.4	100.0 / 100.0	Complex
`TkA01G574720`	`LXL04_000946`	`JCVI_TKOH_00036`	99.5	100.0 / 100.0	Strict
`TkA01G574730`	`LXL04_000943`	`JCVI_TKOH_00036`	95.9	100.0 / 100.0	Complex
`TkA01G574840`	`LXL04_000941`	`JCVI_TKOH_00036`	99.4	100.0 / 100.0	Review
`TkA01G575290`	`LXL04_000937`	`JCVI_TKOH_00036`	99.8	100.0 / 100.0	Review
`TkA01G575300`	`LXL04_000937`	`JCVI_TKOH_00036`	99.8	100.0 / 100.0	Complex
`TkA01G575310`	`LXL04_000935`	`JCVI_TKOH_00036`	99.5	100.0 / 100.0	Strict
`TkA01G575360`	`LXL04_000934`	`JCVI_TKOH_00036`	81.9	100.0 / 100.0	Review
`TkA01G575500`	`LXL04_000931`	`JCVI_TKOH_00036`	96.5	100.0 / 39.649	Review
`TkA01G575510`	`LXL04_000930`	`JCVI_TKOH_00036`	100.0	87.597 / 79.298	Probable
`TkA01G575710`	`LXL04_000928`	`JCVI_TKOH_00036`	99.6	100.0 / 100.0	Strict
`TkA01G575730`	`LXL04_000927`	`JCVI_TKOH_00036`	90.3	100.0 / 95.509	Probable
`TkA01G576150`	`LXL04_000922`	`JCVI_TKOH_00036`	97.9	100.0 / 100.0	Complex
`TkA01G576170`	`LXL04_000921`	`JCVI_TKOH_00036`	100.0	100.0 / 63.692	Review
`TkA01G576320`	`LXL04_000920`	`JCVI_TKOH_00036`	93.8	98.925 / 62.162	Complex
`TkA01G576330`	`LXL04_000919`	`JCVI_TKOH_00036`	100.0	100.0 / 100.0	Review
`TkA01G576340`	`LXL04_000918`	`JCVI_TKOH_00036`	94.2	100.0 / 91.502	Probable
`TkA01G576370`	`LXL04_000917`	`JCVI_TKOH_00036`	100.0	100.0 / 100.0	Review
`TkA01G576390`	`LXL04_000916`	`JCVI_TKOH_00036`	81.3	98.876 / 81.481	Review
`TkA01G576830`	`LXL04_000913`	`JCVI_TKOH_00036`	100.0	100.0 / 100.0	Complex
`TkA01G576840`	`LXL04_000912`	`JCVI_TKOH_00036`	100.0	100.0 / 100.0	Complex
`TkA01G576870`	`LXL04_000911`	`JCVI_TKOH_00036`	99.4	100.0 / 100.0	Strict
`TkA01G577070`	`LXL04_000908`	`JCVI_TKOH_00036`	99.8	100.0 / 92.127	Strict
`TkA01G577080`	`LXL04_000907`	`JCVI_TKOH_00036`	100.0	100.0 / 100.0	Strict
`TkA01G577090`	`LXL04_000906`	`JCVI_TKOH_00036`	98.0	99.51 / 51.91	Review
`TkA01G577100`	`LXL04_000906`	`JCVI_TKOH_00036`	99.0	96.226 / 45.458	Review
`TkA01G577210`	`LXL04_000905`	`JCVI_TKOH_00036`	99.1	100.0 / 100.0	Strict
`TkA01G577660`	`LXL04_000901`	`JCVI_TKOH_00036`	99.2	100.0 / 100.0	Strict
`TkA01G578190`	`LXL04_000897`	`JCVI_TKOH_00036`	99.7	83.371 / 99.464	Strict
`TkA01G578250`	`LXL04_000896`	`JCVI_TKOH_00036`	96.7	100.0 / 100.0	Strict
`TkA01G578260`	`LXL04_000895`	`JCVI_TKOH_00036`	99.6	100.0 / 100.0	Strict
`TkA01G578270`	`LXL04_000894`	`JCVI_TKOH_00036`	99.8	90.638 / 41.888	Review
`TkA01G578460`	`LXL04_000893`	`JCVI_TKOH_00036`	99.4	100.0 / 100.0	Strict
`TkA01G578470`	`LXL04_000892`	`JCVI_TKOH_00036`	99.5	100.0 / 100.0	Strict
`TkA01G578490`	`LXL04_000890`	`JCVI_TKOH_00036`	99.7	99.681 / 78.195	Probable
`TkA01G578500`	`LXL04_000889`	`JCVI_TKOH_00036`	67.5	96.635 / 58.648	Complex
`TkA01G578730`	`LXL04_000887`	`JCVI_TKOH_00036`	100.0	100.0 / 100.0	Strict
`TkA01G578800`	`LXL04_000885`	`JCVI_TKOH_00036`	100.0	100.0 / 100.0	Strict
`TkA01G578810`	`LXL04_000884`	`JCVI_TKOH_00036`	99.2	100.0 / 100.0	Strict
`TkA01G578950`	`LXL04_000882`	`JCVI_TKOH_00036`	98.1	97.196 / 16.482	Review
`TkA01G578970`	`LXL04_000882`	`JCVI_TKOH_00036`	99.6	100.0 / 43.106	Review
`TkA01G579320`	`LXL04_000876`	`JCVI_TKOH_00036`	89.5	95.798 / 82.222	Review
`TkA01G579440`	`LXL04_000869`	`JCVI_TKOH_00036`	99.3	100.0 / 100.0	Strict
`TkA01G579480`	`LXL04_000868`	`JCVI_TKOH_00036`	95.0	100.0 / 100.0	Strict
`TkA01G579680`	`LXL04_000866`	`JCVI_TKOH_00036`	99.4	100.0 / 100.0	Strict
`TkA01G579780`	`LXL04_000865`	`JCVI_TKOH_00036`	99.8	100.0 / 100.0	Complex
`TkA01G579790`	`LXL04_000864`	`JCVI_TKOH_00036`	100.0	100.0 / 100.0	Strict
`TkA01G579810`	`LXL04_000863`	`JCVI_TKOH_00036`	97.0	100.0 / 81.859	Strict
`TkA01G580300`	`LXL04_000859`	`JCVI_TKOH_00036`	70.7	95.76 / 55.433	Complex
`TkA01G580330`	`LXL04_000857`	`JCVI_TKOH_00036`	100.0	98.148 / 93.451	Strict
`TkA01G580340`	`LXL04_000856`	`JCVI_TKOH_00036`	100.0	100.0 / 100.0	Review
`TkA01G580350`	`LXL04_000855`	`JCVI_TKOH_00036`	93.9	100.0 / 79.851	Probable
`TkA01G580360`	`LXL04_000854`	`JCVI_TKOH_00036`	99.1	100.0 / 100.0	Complex
`TkA01G580750`	`LXL04_000851`	`JCVI_TKOH_00036`	100.0	30.469 / 6.599	Complex
`TkA01G580880`	`LXL04_000849`	`JCVI_TKOH_00036`	96.9	88.417 / 97.863	Strict
`TkA01G580890`	`LXL04_000850`	`JCVI_TKOH_00036`	99.5	100.0 / 100.0	Complex
`TkA01G580990`	`LXL04_000847`	`JCVI_TKOH_00036`	99.7	100.0 / 100.0	Strict
`TkA01G581060`	`LXL04_000846`	`JCVI_TKOH_00036`	94.0	100.0 / 100.0	Probable
`TkA01G581070`	`LXL04_000845`	`JCVI_TKOH_00036`	100.0	100.0 / 100.0	Strict
`TkA01G581180`	`LXL04_000842`	`JCVI_TKOH_00036`	100.0	100.0 / 60.0	Complex
`TkA01G581200`	`LXL04_000841`	`JCVI_TKOH_00036`	100.0	100.0 / 100.0	Strict
`TkA01G581210`	`LXL04_000840`	`JCVI_TKOH_00036`	99.3	100.0 / 99.764	Strict
`TkA01G581380`	`LXL04_000839`	`JCVI_TKOH_00036`	100.0	100.0 / 72.816	Complex
`TkA01G581400`	`LXL04_000836`	`JCVI_TKOH_00036`	99.8	100.0 / 95.025	Complex
`TkA01G581430`	`LXL04_000835`	`JCVI_TKOH_00036`	79.7	94.298 / 98.405	Complex
`TkA01G581450`	`LXL04_000835`	`JCVI_TKOH_00036`	99.8	100.0 / 100.0	Complex
`TkA01G581530`	`LXL04_000834`	`JCVI_TKOH_00036`	94.9	100.0 / 92.275	Probable
`TkA01G581540`	`LXL04_000833`	`JCVI_TKOH_00036`	96.4	98.382 / 98.693	Complex
`TkA01G581700`	`LXL04_000829`	`JCVI_TKOH_00036`	99.5	100.0 / 100.0	Strict
`TkA01G581710`	`LXL04_000828`	`JCVI_TKOH_00036`	99.5	100.0 / 100.0	Strict
`TkA01G581730`	`LXL04_000827`	`JCVI_TKOH_00036`	99.2	100.0 / 90.144	Complex
`TkA01G581910`	`LXL04_000825`	`JCVI_TKOH_00036`	97.9	100.0 / 98.946	Strict