Orthology / Synteny Evidence

Inspect cross-reference orthology and synteny-block evidence.

TkA01G624900 LXL04_000258 JCVI_TKOH_00001 Gene ID Converter

Evidence boundary: TK1151 and OH-1004 are different materials of the same species. This page shows ortholog and synteny ID correspondence between two reference genomes, not a same-cultivar genome-version upgrade. Blocks are based on DIAMOND RBH plus coordinate-order anchors and can be further refined by MCScanX/JCVI. JCVI_TKOH_ block IDs are also accepted.

Global Block Summary

Synteny blocks

427

ID converter records

84884

High confidence

302

Medium confidence

125

Material	Assembly	Genes	Gap runs	Telomere scan
TK1151	`TK1151_GWHBCHF00000000`	45224	1917	0/9
OH-1004	`OH1004_GCA_047496595.1`	40057	131	0/711

Query Interpretation

Input ID

JCVI_TKOH_00302

Query type

Block ID

Crosswalk plus synteny evidence

Resolved gene

None

No rubber dandelion gene was resolved

Linked evidence

0 / 1 / 552

crosswalk / blocks / anchors

Best block: JCVI_TKOH_00302

The query resolves to a synteny-block ID. Block span and anchor genes are shown first.

Gene ID Converter Download current result

Linear Synteny View

The best synteny block for the current query is shown as a linear ribbon.

JCVI_TKOH_00302 Chr07 20786-16362785 Chr06 1031744-17191746 mixed High 152 anchors

High Medium Other Only the first 12 anchors are drawn

The anchor table is paginated; TSV contains all anchors for the current query. The ribbon shows only a partial linear backbone of the current block.

Current Query Evidence

No ID correspondence record is available for the current query.

Synteny Evidence

Block	Query location	Target location	Orientation	Current mapped anchors	Confidence	Note
`JCVI_TKOH_00302`	Chr07:20786-16362785	Chr06:1031744-17191746	mixed	552	High	Formal JCVI synteny block from rebuilt ID map pipeline.

Block Anchor Genes

Total anchors: 552 · Showing 401–552 · Page 3/3

Previous Download All Anchors TSV

TkA07G039840 → LXL04_027197

100.0%

TkA07G039860 → LXL04_027198

93.8%

TkA07G039900 → LXL04_027212

100.0%

TkA07G040080 → LXL04_027213

97.6%

TkA07G040090 → LXL04_027214

97.4%

TkA07G040120 → LXL04_027216

89.8%

TkA07G040140 → LXL04_027217

87.0%

TkA07G040170 → LXL04_027220

100.0%

TkA07G040220 → LXL04_027221

94.6%

TkA07G040290 → LXL04_027222

100.0%

TkA07G040320 → LXL04_027222

87.9%

TkA07G040330 → LXL04_027223

100.0%

TK1151 gene	OH-1004 gene	Block	Identity	Coverage	Confidence
`TkA07G039840`	`LXL04_027197`	`JCVI_TKOH_00302`	100.0	78.453 / 38.378	Complex
`TkA07G039860`	`LXL04_027198`	`JCVI_TKOH_00302`	93.8	95.526 / 80.415	Probable
`TkA07G039900`	`LXL04_027212`	`JCVI_TKOH_00302`	100.0	100.0 / 82.543	Strict
`TkA07G040080`	`LXL04_027213`	`JCVI_TKOH_00302`	97.6	100.0 / 100.0	Strict
`TkA07G040090`	`LXL04_027214`	`JCVI_TKOH_00302`	97.4	81.917 / 54.026	Review
`TkA07G040120`	`LXL04_027216`	`JCVI_TKOH_00302`	89.8	89.714 / 32.081	Review
`TkA07G040140`	`LXL04_027217`	`JCVI_TKOH_00302`	87.0	62.4 / 44.654	Review
`TkA07G040170`	`LXL04_027220`	`JCVI_TKOH_00302`	100.0	100.0 / 92.337	Strict
`TkA07G040220`	`LXL04_027221`	`JCVI_TKOH_00302`	94.6	100.0 / 89.179	Probable
`TkA07G040290`	`LXL04_027222`	`JCVI_TKOH_00302`	100.0	93.016 / 51.585	Review
`TkA07G040320`	`LXL04_027222`	`JCVI_TKOH_00302`	87.9	98.428 / 48.415	Complex
`TkA07G040330`	`LXL04_027223`	`JCVI_TKOH_00302`	100.0	100.0 / 70.229	Probable
`TkA07G040340`	`LXL04_027224`	`JCVI_TKOH_00302`	79.7	97.188 / 71.167	Complex
`TkA07G040410`	`LXL04_027224`	`JCVI_TKOH_00302`	100.0	18.803 / 5.034	Complex
`TkA07G040420`	`LXL04_027224`	`JCVI_TKOH_00302`	100.0	100.0 / 71.854	Complex
`TkA07G040480`	`LXL04_027227`	`JCVI_TKOH_00302`	100.0	100.0 / 100.0	Strict
`TkA07G040600`	`LXL04_027229`	`JCVI_TKOH_00302`	99.1	58.378 / 100.0	Review
`TkA07G040610`	`LXL04_027230`	`JCVI_TKOH_00302`	99.7	96.522 / 70.37	Probable
`TkA07G040620`	`LXL04_027231`	`JCVI_TKOH_00302`	100.0	98.773 / 50.789	Review
`TkA07G040630`	`LXL04_027231`	`JCVI_TKOH_00302`	67.2	51.163 / 21.136	Complex
`TkA07G040640`	`LXL04_027232`	`JCVI_TKOH_00302`	100.0	100.0 / 100.0	Complex
`TkA07G040660`	`LXL04_027233`	`JCVI_TKOH_00302`	100.0	100.0 / 100.0	Strict
`TkA07G040710`	`LXL04_027234`	`JCVI_TKOH_00302`	99.0	100.0 / 100.0	Strict
`TkA07G040790`	`LXL04_027235`	`JCVI_TKOH_00302`	80.3	96.68 / 98.565	Review
`TkA07G040830`	`LXL04_027236`	`JCVI_TKOH_00302`	91.3	100.0 / 66.805	Complex
`TkA07G040850`	`LXL04_027237`	`JCVI_TKOH_00302`	99.3	100.0 / 18.206	Review
`TkA07G040880`	`LXL04_027237`	`JCVI_TKOH_00302`	99.3	100.0 / 18.206	Review
`TkA07G040930`	`LXL04_027237`	`JCVI_TKOH_00302`	97.7	92.973 / 45.383	Review
`TkA07G041040`	`LXL04_027238`	`JCVI_TKOH_00302`	99.4	100.0 / 43.005	Review
`TkA07G041050`	`LXL04_027238`	`JCVI_TKOH_00302`	100.0	82.5 / 42.746	Review
`TkA07G041060`	`LXL04_027239`	`JCVI_TKOH_00302`	85.6	94.326 / 80.0	Review
`TkA07G041100`	`LXL04_027240`	`JCVI_TKOH_00302`	95.7	100.0 / 100.0	Strict
`TkA07G041120`	`LXL04_027241`	`JCVI_TKOH_00302`	100.0	100.0 / 95.733	Strict
`TkA07G041220`	`LXL04_027243`	`JCVI_TKOH_00302`	91.5	100.0 / 100.0	Probable
`TkA07G041230`	`LXL04_027244`	`JCVI_TKOH_00302`	100.0	100.0 / 100.0	Strict
`TkA07G041310`	`LXL04_027246`	`JCVI_TKOH_00302`	100.0	98.218 / 56.045	Review
`TkA07G041320`	`LXL04_027247`	`JCVI_TKOH_00302`	98.1	95.266 / 49.768	Review
`TkA07G041810`	`LXL04_027251`	`JCVI_TKOH_00302`	76.1	100.0 / 100.0	Complex
`TkA07G042930`	`LXL04_027263`	`JCVI_TKOH_00302`	46.0	35.0 / 48.663	Complex
`TkA07G042940`	`LXL04_027263`	`JCVI_TKOH_00302`	64.3	64.122 / 41.711	Complex
`TkA07G043280`	`LXL04_027259`	`JCVI_TKOH_00302`	99.1	58.824 / 58.824	Complex
`TkA07G043290`	`LXL04_027260`	`JCVI_TKOH_00302`	100.0	44.199 / 53.691	Review
`TkA07G043590`	`LXL04_027263`	`JCVI_TKOH_00302`	100.0	53.476 / 53.476	Complex
`TkA07G043650`	`LXL04_027264`	`JCVI_TKOH_00302`	88.4	100.0 / 75.0	Review
`TkA07G043720`	`LXL04_027266`	`JCVI_TKOH_00302`	98.9	100.0 / 89.873	Strict
`TkA07G043930`	`LXL04_027271`	`JCVI_TKOH_00302`	98.3	89.744 / 90.713	Strict
`TkA07G044050`	`LXL04_027273`	`JCVI_TKOH_00302`	98.4	40.0 / 35.359	Review
`TkA07G044080`	`LXL04_027275`	`JCVI_TKOH_00302`	70.6	100.0 / 100.0	Review
`TkA07G044970`	`LXL04_027298`	`JCVI_TKOH_00302`	98.8	100.0 / 100.0	Strict
`TkA07G045090`	`LXL04_027297`	`JCVI_TKOH_00302`	99.7	100.0 / 95.263	Strict
`TkA07G045370`	`LXL04_027293`	`JCVI_TKOH_00302`	99.7	100.0 / 100.0	Strict
`TkA07G045610`	`LXL04_027291`	`JCVI_TKOH_00302`	99.8	100.0 / 100.0	Strict
`TkA07G045930`	`LXL04_027287`	`JCVI_TKOH_00302`	98.4	90.56 / 18.648	Review
`TkA07G045940`	`LXL04_027286`	`JCVI_TKOH_00302`	100.0	100.0 / 100.0	Strict
`TkA07G046340`	`LXL04_027285`	`JCVI_TKOH_00302`	74.7	100.0 / 100.0	Review
`TkA07G047130`	`LXL04_027302`	`JCVI_TKOH_00302`	97.7	100.0 / 58.967	Review
`TkA07G047280`	`LXL04_027303`	`JCVI_TKOH_00302`	91.6	82.909 / 69.97	Complex
`TkA07G047300`	`LXL04_027304`	`JCVI_TKOH_00302`	99.4	100.0 / 100.0	Strict
`TkA07G047730`	`LXL04_027305`	`JCVI_TKOH_00302`	44.5	82.486 / 98.986	Complex
`TkA07G047930`	`LXL04_027307`	`JCVI_TKOH_00302`	76.2	81.183 / 40.108	Complex
`TkA07G047960`	`LXL04_027306`	`JCVI_TKOH_00302`	99.7	100.0 / 100.0	Strict
`TkA07G048180`	`LXL04_027307`	`JCVI_TKOH_00302`	99.6	96.761 / 64.77	Complex
`TkA07G048320`	`LXL04_027308`	`JCVI_TKOH_00302`	100.0	100.0 / 100.0	Strict
`TkA07G048400`	`LXL04_027309`	`JCVI_TKOH_00302`	98.6	100.0 / 100.0	Complex
`TkA07G048450`	`LXL04_027311`	`JCVI_TKOH_00302`	99.6	100.0 / 100.0	Complex
`TkA07G048850`	`LXL04_027314`	`JCVI_TKOH_00302`	99.1	86.398 / 93.989	Strict
`TkA07G048860`	`LXL04_027313`	`JCVI_TKOH_00302`	99.7	100.0 / 100.0	Complex
`TkA07G049910`	`LXL04_027319`	`JCVI_TKOH_00302`	100.0	100.0 / 100.0	Review
`TkA07G050350`	`LXL04_027324`	`JCVI_TKOH_00302`	87.2	100.0 / 100.0	Complex
`TkA07G050580`	`LXL04_027328`	`JCVI_TKOH_00302`	96.1	100.0 / 100.0	Strict
`TkA07G050600`	`LXL04_027329`	`JCVI_TKOH_00302`	97.9	100.0 / 100.0	Complex
`TkA07G050680`	`LXL04_027330`	`JCVI_TKOH_00302`	99.4	100.0 / 100.0	Strict
`TkA07G050690`	`LXL04_027331`	`JCVI_TKOH_00302`	99.6	98.374 / 49.692	Review
`TkA07G050700`	`LXL04_027332`	`JCVI_TKOH_00302`	90.9	93.529 / 42.067	Complex
`TkA07G050710`	`LXL04_027333`	`JCVI_TKOH_00302`	99.2	91.607 / 46.516	Review
`TkA07G050720`	`LXL04_027333`	`JCVI_TKOH_00302`	88.3	98.841 / 34.661	Complex
`TkA07G050860`	`LXL04_027336`	`JCVI_TKOH_00302`	97.6	100.0 / 100.0	Strict
`TkA07G051030`	`LXL04_027339`	`JCVI_TKOH_00302`	99.7	98.621 / 30.329	Review
`TkA07G051860`	`LXL04_027344`	`JCVI_TKOH_00302`	79.7	100.0 / 100.0	Review
`TkA07G051970`	`LXL04_027347`	`JCVI_TKOH_00302`	99.9	100.0 / 100.0	Strict
`TkA07G052390`	`LXL04_027352`	`JCVI_TKOH_00302`	92.3	100.0 / 100.0	Probable
`TkA07G052430`	`LXL04_027353`	`JCVI_TKOH_00302`	99.6	100.0 / 45.714	Review
`TkA07G052440`	`LXL04_027354`	`JCVI_TKOH_00302`	97.1	100.0 / 100.0	Complex
`TkA07G052460`	`LXL04_027355`	`JCVI_TKOH_00302`	97.8	100.0 / 100.0	Complex
`TkA07G052620`	`LXL04_027365`	`JCVI_TKOH_00302`	62.0	95.522 / 53.476	Complex
`TkA07G052650`	`LXL04_027357`	`JCVI_TKOH_00302`	99.7	99.167 / 34.829	Review
`TkA07G052660`	`LXL04_027357`	`JCVI_TKOH_00302`	99.2	91.971 / 12.293	Review
`TkA07G052700`	`LXL04_027359`	`JCVI_TKOH_00302`	100.0	79.343 / 31.181	Complex
`TkA07G052710`	`LXL04_027360`	`JCVI_TKOH_00302`	99.3	100.0 / 100.0	Strict
`TkA07G052850`	`LXL04_027355`	`JCVI_TKOH_00302`	62.2	97.107 / 67.697	Complex
`TkA07G052860`	`LXL04_027364`	`JCVI_TKOH_00302`	47.6	100.0 / 100.0	Complex
`TkA07G052890`	`LXL04_027362`	`JCVI_TKOH_00302`	100.0	100.0 / 76.782	Complex
`TkA07G052900`	`LXL04_027366`	`JCVI_TKOH_00302`	89.6	95.726 / 14.892	Complex
`TkA07G052960`	`LXL04_027355`	`JCVI_TKOH_00302`	54.7	68.915 / 65.169	Complex
`TkA07G052970`	`LXL04_027364`	`JCVI_TKOH_00302`	81.8	100.0 / 66.766	Complex
`TkA07G053100`	`LXL04_027366`	`JCVI_TKOH_00302`	100.0	91.667 / 15.068	Review
`TkA07G053140`	`LXL04_027366`	`JCVI_TKOH_00302`	98.7	94.699 / 17.366	Review
`TkA07G053160`	`LXL04_027368`	`JCVI_TKOH_00302`	85.2	100.0 / 100.0	Complex
`TkA07G053220`	`LXL04_027366`	`JCVI_TKOH_00302`	98.7	95.62 / 17.366	Review
`TkA07G053240`	`LXL04_027368`	`JCVI_TKOH_00302`	85.4	100.0 / 100.0	Complex
`TkA07G053340`	`LXL04_027369`	`JCVI_TKOH_00302`	46.7	90.476 / 58.457	Complex
`TkA07G053350`	`LXL04_027370`	`JCVI_TKOH_00302`	99.7	98.691 / 88.706	Complex
`TkA07G053450`	`LXL04_027372`	`JCVI_TKOH_00302`	78.7	75.806 / 95.122	Review
`TkA07G053470`	`LXL04_027373`	`JCVI_TKOH_00302`	93.6	100.0 / 100.0	Complex
`TkA07G053480`	`LXL04_027374`	`JCVI_TKOH_00302`	96.1	100.0 / 100.0	Complex
`TkA07G053500`	`LXL04_027377`	`JCVI_TKOH_00302`	96.3	99.518 / 95.801	Strict
`TkA07G054240`	`LXL04_027382`	`JCVI_TKOH_00302`	99.6	100.0 / 100.0	Strict
`TkA07G054590`	`LXL04_027385`	`JCVI_TKOH_00302`	100.0	100.0 / 100.0	Strict
`TkA07G054610`	`LXL04_027386`	`JCVI_TKOH_00302`	96.9	91.026 / 91.026	Complex
`TkA07G054650`	`LXL04_027387`	`JCVI_TKOH_00302`	88.0	100.0 / 100.0	Complex
`TkA07G055800`	`LXL04_027398`	`JCVI_TKOH_00302`	100.0	98.592 / 81.159	Complex
`TkA07G055950`	`LXL04_027401`	`JCVI_TKOH_00302`	66.7	100.0 / 100.0	Complex
`TkA07G055960`	`LXL04_027402`	`JCVI_TKOH_00302`	100.0	93.048 / 99.713	Complex
`TkA07G056010`	`LXL04_027405`	`JCVI_TKOH_00302`	98.8	100.0 / 100.0	Review
`TkA07G056040`	`LXL04_027402`	`JCVI_TKOH_00302`	69.5	96.676 / 100.0	Complex
`TkA07G056080`	`LXL04_027406`	`JCVI_TKOH_00302`	100.0	66.667 / 32.889	Complex
`TkA07G056110`	`LXL04_027412`	`JCVI_TKOH_00302`	87.8	68.047 / 100.0	Complex
`TkA07G056120`	`LXL04_027412`	`JCVI_TKOH_00302`	83.0	100.0 / 97.391	Complex
`TkA07G056130`	`LXL04_027412`	`JCVI_TKOH_00302`	100.0	100.0 / 100.0	Complex
`TkA07G056140`	`LXL04_027411`	`JCVI_TKOH_00302`	100.0	100.0 / 56.388	Review
`TkA07G057110`	`LXL04_027417`	`JCVI_TKOH_00302`	99.6	91.762 / 73.354	Probable
`TkA07G057540`	`LXL04_027419`	`JCVI_TKOH_00302`	100.0	100.0 / 100.0	Complex
`TkA07G057780`	`LXL04_027422`	`JCVI_TKOH_00302`	86.0	100.0 / 35.233	Complex
`TkA07G058410`	`LXL04_027425`	`JCVI_TKOH_00302`	81.7	100.0 / 82.963	Review
`TkA07G058480`	`LXL04_027427`	`JCVI_TKOH_00302`	100.0	100.0 / 100.0	Strict
`TkA07G058610`	`LXL04_027428`	`JCVI_TKOH_00302`	99.2	100.0 / 100.0	Complex
`TkA07G058710`	`LXL04_027431`	`JCVI_TKOH_00302`	100.0	100.0 / 100.0	Strict
`TkA07G058720`	`LXL04_027432`	`JCVI_TKOH_00302`	100.0	100.0 / 100.0	Strict
`TkA07G058760`	`LXL04_027433`	`JCVI_TKOH_00302`	99.2	100.0 / 38.531	Review
`TkA07G058850`	`LXL04_027435`	`JCVI_TKOH_00302`	86.8	100.0 / 54.829	Complex
`TkA07G058910`	`LXL04_027435`	`JCVI_TKOH_00302`	98.9	100.0 / 100.0	Complex
`TkA07G058950`	`LXL04_027439`	`JCVI_TKOH_00302`	99.6	100.0 / 95.286	Complex
`TkA07G059430`	`LXL04_027442`	`JCVI_TKOH_00302`	99.5	95.31 / 100.0	Review
`TkA07G059450`	`LXL04_027442`	`JCVI_TKOH_00302`	91.6	100.0 / 94.376	Complex
`TkA07G059800`	`LXL04_027444`	`JCVI_TKOH_00302`	90.5	100.0 / 100.0	Probable
`TkA07G059810`	`LXL04_027445`	`JCVI_TKOH_00302`	100.0	100.0 / 100.0	Strict
`TkA07G059820`	`LXL04_027446`	`JCVI_TKOH_00302`	99.5	100.0 / 100.0	Complex
`TkA07G059830`	`LXL04_027447`	`JCVI_TKOH_00302`	100.0	100.0 / 100.0	Review
`TkA07G059850`	`LXL04_027446`	`JCVI_TKOH_00302`	67.4	100.0 / 100.0	Complex
`TkA07G059860`	`LXL04_027449`	`JCVI_TKOH_00302`	98.0	100.0 / 100.0	Review
`TkA07G060260`	`LXL04_027464`	`JCVI_TKOH_00302`	98.8	87.848 / 51.256	Review
`TkA07G060380`	`LXL04_027465`	`JCVI_TKOH_00302`	79.4	100.0 / 100.0	Complex
`TkA07G060590`	`LXL04_027467`	`JCVI_TKOH_00302`	100.0	100.0 / 100.0	Strict
`TkA07G060750`	`LXL04_027476`	`JCVI_TKOH_00302`	100.0	100.0 / 100.0	Strict
`TkA07G060840`	`LXL04_027479`	`JCVI_TKOH_00302`	100.0	100.0 / 100.0	Strict
`TkA07G061060`	`LXL04_027481`	`JCVI_TKOH_00302`	94.1	98.416 / 87.889	Probable
`TkA07G061290`	`LXL04_027482`	`JCVI_TKOH_00302`	98.2	100.0 / 100.0	Strict
`TkA07G061300`	`LXL04_027483`	`JCVI_TKOH_00302`	99.3	94.664 / 65.28	Review
`TkA07G061380`	`LXL04_027484`	`JCVI_TKOH_00302`	100.0	49.194 / 46.212	Review
`TkA07G061490`	`LXL04_027488`	`JCVI_TKOH_00302`	94.4	100.0 / 34.853	Review
`TkA07G061630`	`LXL04_027491`	`JCVI_TKOH_00302`	100.0	100.0 / 100.0	Strict
`TkA07G061850`	`LXL04_027493`	`JCVI_TKOH_00302`	99.5	43.653 / 25.554	Complex