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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkA07G134470
Reference: TK1151 Chr: Chr07 Coordinates: 34924718-34928060 Strand: + Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

3130 bp · TkA07G134470|TK1151|cDNA

ATAATGAATCCACAAAAACTGCATTCCCTTTTCTTCTCCACAGTTTTCTTTTCAATAGTTTCAGGAGACGAAAAAGCTCAAATTTTTAACGACCGAGCTTCTCTCCTCACGTTCTTTTCCGGCGTCGTTTCTGATCCCGGAAACATTCTTCATAACTGGAACAGTTCTTTGATTCCAGTCTGTAACTGGACCGGAATCACATGCAATCAGAATCGTGATTTCGTTCTTGAGTTAGATCTAAGTGGAGCTTCACTCCATGG...

CDS

Download CDS FASTA

2892 bp · TkA07G134470|TK1151|CDS

ATGAATCCACAAAAACTGCATTCCCTTTTCTTCTCCACAGTTTTCTTTTCAATAGTTTCAGGAGACGAAAAAGCTCAAATTTTTAACGACCGAGCTTCTCTCCTCACGTTCTTTTCCGGCGTCGTTTCTGATCCCGGAAACATTCTTCATAACTGGAACAGTTCTTTGATTCCAGTCTGTAACTGGACCGGAATCACATGCAATCAGAATCGTGATTTCGTTCTTGAGTTAGATCTAAGTGGAGCTTCACTCCATGGGAT...

Protein

Download Protein FASTA

963 aa · TkA07G134470|TK1151|PROTEIN

MNPQKLHSLFFSTVFFSIVSGDEKAQIFNDRASLLTFFSGVVSDPGNILHNWNSSLIPVCNWTGITCNQNRDFVLELDLSGASLHGIISPAISRLSRLKVLDLSRNFFEGGIPGEIGYLSELRQLSLSSNLLQGRIPFELGFLSKIQYLDLGSNRLVGDIPMALFCNGTSVLEYVDLSNNSISGPIPFTEECEISELRFLLVWSNKLTGRIPSALANSSKLKWLDLEVNGFEGELPFEIVKNLSNLQFVYLSYNRFSGPL...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA07G134470
TK1151 IDTkA07G134470
OH-1004 IDLXL04_028253
Relationship / confidenceRbh High Identity Coverage Synteny / Strict
Protein identity (%)99.300
Protein coverage (%)TK1151 100.000 / OH-1004 100.000
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA07G134470
LocationChr07:34924718-34928060 (+)
DescriptionSimilar to At2g24130: Putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g24130
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At2g24130 Putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g24130. No verified direct reference in this release
At3g47570 Probable LRR receptor-like serine/threonine-protein kinase At3g47570. No verified direct reference in this release
At3g47110 Putative receptor-like protein kinase At3g47110. No verified direct reference in this release

Rice

Reference gene IDPossible functionPapers / DOI
UniProt: Q1MX30 Receptor kinase that detects X.oryzae pv. oryzae protein Ax21 to promote innate immunity. No verified direct reference in this release
Os11g0569733 Receptor kinase that detects X.oryzae pv. oryzae protein Ax21 to promote innate immunity.
Cleavage and nuclear localization of the rice XA21 immune receptor.2012 · DOI: 10.1038/ncomms1932
Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_028253 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0002237 response to molecule of bacterial origin Biological Process
GO:0002764 immune response-regulating signaling pathway Biological Process
GO:0006952 defense response Biological Process
GO:0009617 response to bacterium Biological Process
GO:0009626 plant-type hypersensitive response Biological Process
GO:0009755 hormone-mediated signaling pathway Biological Process
GO:0016045 detection of bacterium Biological Process
GO:0031349 positive regulation of defense response Biological Process
GO:0046777 protein autophosphorylation Biological Process
GO:0140426 pathogen-associated molecular pattern receptor signaling pathway Biological Process
GO:1900426 positive regulation of defense response to bacterium Biological Process
GO:0005634 nucleus Cellular Component
KEGG gene cross-reference
ath:AT2G24130
ath:AT3G47570
ath:AT5G20480
osa:107276510
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cell membrane0.865
Rank 1 · TkA07G134470 · TK1151
Endoplasmic reticulum0.090
Rank 2 · TkA07G134470 · TK1151
Cytoplasm0.058
Rank 3 · TkA07G134470 · TK1151
Nucleus0.041
Rank 4 · TkA07G134470 · TK1151
Lysosome / Vacuole0.028
Rank 5 · TkA07G134470 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF08263LRRNT_229-68 aa
PF00560LRR_176-95 aa
PF13855LRR_876-132 aa
PF12799LRR_476-106 aa
PF23952LRR_EndoS76-106 aa
PF23211LRR_LRWD178-132 aa
PF29594LRR_SKP288-106 aa
PF23598LRR_1489-156 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA07G134470PF08263LRRNT_229684.9e-1040.2
TkA07G134470PF00560LRR_176952.7e-59184.9
TkA07G134470PF13855LRR_8761321.8e-40137.2
TkA07G134470PF12799LRR_4761068.4e-33112.4
TkA07G134470PF23952LRR_EndoS761061.99.4
TkA07G134470PF23211LRR_LRWD1781320.001419.1
TkA07G134470PF29594LRR_SKP2881060.002317.9
TkA07G134470PF23598LRR_14891561.5e-2280.6
TkA07G134470PF24048LRR_NXF1-5891082.68.4
TkA07G134470PF25013LRR_Zer-1901060.01716.0
TkA07G134470PF14580LRR_9951494.17.7
TkA07G134470PF00560LRR_1971192.7e-59184.9
TkA07G134470PF13516LRR_6981060.0002621.5
TkA07G134470PF12799LRR_41211608.4e-33112.4
TkA07G134470PF00560LRR_11221422.7e-59184.9
TkA07G134470PF13516LRR_61221300.0002621.5

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

ProteinOrganismDescriptionIdentityDatabaseConfidence
Q9ZUI0Arabidopsis thalianasp|Q9ZUI0|Y2241_ARATH Putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g2413057.100%Swiss-ProtHigh
C0LGP4Arabidopsis thalianasp|C0LGP4|Y3475_ARATH Probable LRR receptor-like serine/threonine-protein kinase At3g4757042.100%Swiss-ProtLow
Q9SD62Arabidopsis thalianasp|Q9SD62|Y3471_ARATH Putative receptor-like protein kinase At3g4711040.200%Swiss-ProtLow
Q1MX30Oryza sativa subsp. indicasp|Q1MX30|XA21_ORYSI Receptor kinase-like protein Xa2141.700%Swiss-ProtLow
Q2R2D5Oryza sativa subsp. japonicasp|Q2R2D5|XA21_ORYSJ Receptor kinase-like protein Xa2140.800%Swiss-ProtLow

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