ID Crosswalk
Original TK1151 gene IDs are linked to OH-1004 gene-level counterparts. TK1151 and OH-1004 are different Taraxacum kok-saghyz materials, not two releases of the same cultivar. Complete crosswalk coverage does not mean every relationship is one-to-one; complex mappings require review of their category and evidence.
Version Sources
| Version | Assembly / Annotation Accession | Source Database | Publication | DOI / PMID | Download Date |
|---|---|---|---|---|---|
| TK1151 Taraxacum kok-saghyz |
GWHBCHF00000000 GWHBCHF00000000 GFF/RNA/CDS/Protein |
NGDC Genome Warehouse (GWH) |
Extensive sequence divergence between the reference genomes of Taraxacum kok-saghyz and Taraxacum mongolicum Tao Lin, Xia Xu, Huilong Du, Xiuli Fan, Qingwen Chen, et al.; Science China Life Sciences; 2022 |
10.1007/s11427-021-2033-2 PMID: 34939160 |
2026-08-14 |
| OH-1004 / OSU_TarKok_2.0 Taraxacum kok-saghyz |
GCA_047496595.1 GCA_047496595.1_OSU_TarKok_2.0 GenBank GFF |
NCBI Assembly / NGDC integrated NCBI Assembly |
no linked publication found in NCBI/NGDC assembly records as of 2026-08-17 not available |
not available | 2026-08-14 |
Complete Gene ID Crosswalk
TK1151 reference: 45224 genes; 4 rows in the current filter. Showing page 1 / 1.
All
Strict 1:1: 6347
Probable 1:1: 1703
One-to-many: 826
Many-to-one: 24458
Unmapped: 2782
Annotation conflict: 9108
Strict 1:1 requires RBH, high identity, query/target coverage, CDS support, and JCVI synteny. Probable 1:1 still requires RBH and coverage thresholds. Low-coverage, multi-hit, split/merged annotation, and unplaced-sequence cases are excluded from 1:1 conversion. Protein and CDS coverage each use the actual sequence span of the best-scoring single HSP divided by the corresponding representative sequence length; query is TK1151 and target is OH-1004. Protein, CDS, and transcript isoforms are not shown here.
| TK1151 Gene ID | OH-1004 Gene ID | Category | Relationship / confidence | Identity / coverage | Synteny block | Description |
|---|---|---|---|---|---|---|
|
TkA04G158080
Chr04:40890598-40891397 (+)
GWHBCHF00000005
|
LXL04_024031
Chr05:78221271-78226392 (+)
CM104803.1
|
Many-to-one | non reciprocal best hit Complex |
75.000 Q 34.286 / T 6.459 |
TkA04G158080 | |
|
TkA06G185990
Chr06:48541964-48542323 (-)
GWHBCHF00000007
|
LXL04_024031
Chr05:78221271-78226392 (+)
CM104803.1
|
Annotation conflict | RBH but below probable coverage or synteny threshold Review |
100.000 Q 63.025 / T 8.352 |
JCVI_TKOH_00275 | TkA06G185990 |
|
TkA08G063920
Chr08:16335935-16336327 (+)
GWHBCHF00000009
|
LXL04_024031
Chr05:78221271-78226392 (+)
CM104803.1
|
Many-to-one | non reciprocal best hit Complex |
58.200 Q 51.538 / T 6.793 |
TkA08G063920 | |
|
TkA08G148040
Chr08:38577749-38578387 (+)
GWHBCHF00000009
|
LXL04_024031
Chr05:78221271-78226392 (+)
CM104803.1
|
Many-to-one | non reciprocal best hit Complex |
71.600 Q 45.890 / T 7.238 |
TkA08G148040 |
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