Gene Card
Gene overview
cDNA / CDS / Protein Sequences
1674 bp · LXL04_034727|LXL04_034727|OH1004|cDNA
ATGTTTGGGCTTCGTCAAAACAAGCTCACTGTCTGGGAAATTTCAGAGATTATGAACAAGAAAGGTCTAGCGATTTTATTGCGTTCTAAAATGAGGCCTCTCTCTCCTGTCTCTAAGAAAATCAATCGACTGCAAGTTGCTCCTCTGGATGGGAACAGAGTAGCTGCTCAAAATACCTCCAGCAAGACCCCAAGAGATTTTGGGCAAGTACGGGAATCAATGCATTCAGTCATATCAATGAACAGAAAAGAGATACTAGA...
1674 bp · LXL04_034727|LXL04_034727|OH1004|CDS
ATGTTTGGGCTTCGTCAAAACAAGCTCACTGTCTGGGAAATTTCAGAGATTATGAACAAGAAAGGTCTAGCGATTTTATTGCGTTCTAAAATGAGGCCTCTCTCTCCTGTCTCTAAGAAAATCAATCGACTGCAAGTTGCTCCTCTGGATGGGAACAGAGTAGCTGCTCAAAATACCTCCAGCAAGACCCCAAGAGATTTTGGGCAAGTACGGGAATCAATGCATTCAGTCATATCAATGAACAGAAAAGAGATACTAGA...
Protein
Download Protein FASTA557 aa · LXL04_034727|LXL04_034727|OH1004|PROTEIN
MFGLRQNKLTVWEISEIMNKKGLAILLRSKMRPLSPVSKKINRLQVAPLDGNRVAAQNTSSKTPRDFGQVRESMHSVISMNRKEILDTALTEFSEGYFSLSQENRHKLLLVLAREYDLNRIQVRDLMKQYVGLEIPKGEPSFVTTICDGSDEHGHEVEGHLSSFYRIERNLRHALNPMYALLFERLNTHPGGLKFLASVRADILSIIADENIASIRALDSYLKEKLITWLSPANLELHQITWDDPASLLEKIVAYEAVHP...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | LXL04_034727 |
|---|---|
| TK1151 ID | TkA08G430830 |
| OH-1004 ID | LXL04_034727 |
| Relationship / confidence | Rbh Sequence Supported / Probable |
| Protein identity (%) | 94.100 |
| Protein coverage (%) | TK1151 100.000 / OH-1004 100.000Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | OH-1004 / GCA_047496595.1_OSU_TarKok_2.0 |
SNP / Indel variants and carrier samplesCRA009020 · OH-1004
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | LXL04_034727 |
|---|---|
| Location | Chr07:115133287-115139487 (-) |
| Description | Similar to MLYCD: Malonyl-CoA decarboxylase, mitochondrial |
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene ArabidopsisNo hit for this species in the current source table. RiceNo hit for this species in the current source table. |
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · |
| GO annotations (OH1004 source) | GO:0002931 response to ischemia Biological Process GO:0006085 acetyl-CoA biosynthetic process Biological Process GO:0006633 fatty acid biosynthetic process Biological Process GO:0006637 acyl-CoA metabolic process Biological Process GO:0007584 response to nutrient Biological Process GO:0010906 regulation of glucose metabolic process Biological Process GO:0019395 fatty acid oxidation Biological Process GO:0031998 regulation of fatty acid beta-oxidation Biological Process GO:0046320 regulation of fatty acid oxidation Biological Process GO:0046321 positive regulation of fatty acid oxidation Biological Process GO:2001294 malonyl-CoA catabolic process Biological Process GO:0005737 cytoplasm Cellular Component |
| KEGG gene cross-reference | hsa:23417 mmu:56690 rno:85239 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF17408.8MCD_N167-229 aaPF05292.19MCD235-360 aaPF05292.19MCD380-555 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| LXL04_034727 | PF17408.8 | MCD_N | 167 | 229 | 7.7e-11 | 42.7 |
| LXL04_034727 | PF05292.19 | MCD | 235 | 360 | 7.7e-79 | 265.9 |
| LXL04_034727 | PF05292.19 | MCD | 380 | 555 | 7.7e-79 | 265.9 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
No result was found for this query.