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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkAUNG008980
Reference: TK1151 Chr: ChrUn Coordinates: 2263563-2265944 Strand: + Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

2313 bp · TkAUNG008980|TK1151|cDNA

ATGGCGGTACCACATCTTATAACACTGATCGTATTAATATTTCTATCTGAAACACCATTGATATCTTCCTCCTCCGCTTCTTTTTCTTCACCGCCATTTGGGTTAAAACTAGGTTCATCTCTCTCAGTTGCCGACTTCCTGATCTCACCAAATGCCATTTACACCGCCGGATTTTACAGCGTTGGGGAGAATGCTTATTGCTTTTCGATATGGTTCACAAAACCTCTCGCCGACGGGAGTCTCACTATTTTATGGATGGC...

CDS

Download CDS FASTA

2313 bp · TkAUNG008980|TK1151|CDS

ATGGCGGTACCACATCTTATAACACTGATCGTATTAATATTTCTATCTGAAACACCATTGATATCTTCCTCCTCCGCTTCTTTTTCTTCACCGCCATTTGGGTTAAAACTAGGTTCATCTCTCTCAGTTGCCGACTTCCTGATCTCACCAAATGCCATTTACACCGCCGGATTTTACAGCGTTGGGGAGAATGCTTATTGCTTTTCGATATGGTTCACAAAACCTCTCGCCGACGGGAGTCTCACTATTTTATGGATGGC...

Protein

Download Protein FASTA

770 aa · TkAUNG008980|TK1151|PROTEIN

MAVPHLITLIVLIFLSETPLISSSSASFSSPPFGLKLGSSLSVADFLISPNAIYTAGFYSVGENAYCFSIWFTKPLADGSLTILWMANRDLPVNGRFSKLSLLKTGNLVLKDAYQRLPIWTTNTRDSKASAYLKLNNSGNLCLRNKDGEILWQSFDTPTDTLLPNQPLTKDAPLVSSRSVSNYSSGFYKLFFDNDNVVRLVYSDSKLTGIFWPNPELRAWESGRNTYGSRRIGIMDSSGRLTMDVDGNFRAYSLDETRGI...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkAUNG008980
TK1151 IDTkAUNG008980
OH-1004 IDLXL04_014569
Relationship / confidenceRbh High Identity Coverage Local Synteny Minor Chr Pair / Probable
Protein identity (%)96.600
Protein coverage (%)TK1151 100.000 / OH-1004 98.265
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkAUNG008980
LocationChrUn:2263563-2265944 (+)
DescriptionSimilar to PK1: Putative receptor protein kinase ZmPK1
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At2g19130 G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130. No verified direct reference in this release

Rice

Reference gene IDPossible functionPapers / DOI
Os04g0202500 Involved in resistance against the herbivorous insect brown planthopper (N.lugens, BPH). No verified direct reference in this release
UniProt: Q25AG3 Involved in resistance against the herbivorous insect brown planthopper (N.lugens, BPH). No verified direct reference in this release
UniProt: A2XQD3 Involved in resistance against the herbivorous insect brown planthopper (N.lugens, BPH). No verified direct reference in this release
Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_014569 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0006952 defense response Biological Process
GO:0048544 recognition of pollen Biological Process
GO:0051707 response to other organism Biological Process
GO:0005576 extracellular region Cellular Component
GO:0005886 plasma membrane Cellular Component
GO:0016020 membrane Cellular Component
GO:0004672 protein kinase activity Molecular Function
GO:0004674 protein serine/threonine kinase activity Molecular Function
GO:0005516 calmodulin binding Molecular Function
GO:0005524 ATP binding Molecular Function
GO:0030246 carbohydrate binding Molecular Function
GO:0031625 ubiquitin protein ligase binding Molecular Function
KEGG gene cross-reference
ath:AT2G19130
dosa:Os04g0202350
dosa:Os04g0202500
osa:9266608
zma:542378
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cell membrane0.838
Rank 1 · TkAUNG008980 · TK1151
Endoplasmic reticulum0.086
Rank 2 · TkAUNG008980 · TK1151
Cytoplasm0.068
Rank 3 · TkAUNG008980 · TK1151
Nucleus0.037
Rank 4 · TkAUNG008980 · TK1151
Extracellular0.032
Rank 5 · TkAUNG008980 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF01453B_lectin82-171 aa
PF00954S_locus_glycop124-152 aa
PF01453B_lectin233-263 aa
PF00954S_locus_glycop238-298 aa
PF01683EB266-304 aa
PF08276PAN_2276-285 aa
PF14295PAN_4277-285 aa
PF08276PAN_2321-368 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkAUNG008980PF01453B_lectin821714.3e-2382.5
TkAUNG008980PF00954S_locus_glycop1241523.2e-0628.4
TkAUNG008980PF01453B_lectin2332634.3e-2382.5
TkAUNG008980PF00954S_locus_glycop2382983.2e-0628.4
TkAUNG008980PF01683EB2663046.07.7
TkAUNG008980PF08276PAN_22762850.0001222.8
TkAUNG008980PF14295PAN_42772850.810.5
TkAUNG008980PF08276PAN_23213680.0001222.8
TkAUNG008980PF00024PAN_13273720.001219.4
TkAUNG008980PF14295PAN_43353790.810.5
TkAUNG008980PF00954S_locus_glycop3513673.2e-0628.4
TkAUNG008980PF01683EB3513636.07.7
TkAUNG008980PF07714PK_Tyr_Ser-Thr4987663.4e-40138.7
TkAUNG008980PF00069Pkinase5007641.3e-49169.7
TkAUNG008980PF03109ABC15085310.002217.9
TkAUNG008980PF03109ABC15646460.002217.9

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

ProteinOrganismDescriptionIdentityDatabaseConfidence
O64477Arabidopsis thalianasp|O64477|Y2913_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At2g1913032.500%Swiss-ProtMedium
Q0JEU6Oryza sativa subsp. japonicasp|Q0JEU6|LERK3_ORYSJ G-type lectin S-receptor-like serine/threonine-protein kinase LECRK332.600%Swiss-ProtMedium
Q25AG3Oryza sativa subsp. indicasp|Q25AG3|LERK3_ORYSI G-type lectin S-receptor-like serine/threonine-protein kinase LECRK332.600%Swiss-ProtMedium
A2XQD3Oryza sativa subsp. indicasp|A2XQD3|LERK2_ORYSI G-type lectin S-receptor-like serine/threonine-protein kinase LECRK232.800%Swiss-ProtMedium

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