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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkA08G420500
Reference: TK1151 Chr: Chr08 Coordinates: 106899811-106909639 Strand: - Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

1811 bp · TkA08G420500|TK1151|cDNA

GTTTACACTCACTGGGAAGACATTTTTCCCAACGAGTACTGTCGTAATTGCTTGCTTGAAGCCCGTGATGATATCAACAACACATGCCCGTCGTCAAAAGATGCAGTATTTTGGAACGACGACTGCATGTTACGCTATGCTAACTACTCAATGCTGTCGATTATGGACTCCAACATTTTTCTGCATGAATGCAACGGTAATAATATTTCTGAAAAGGTATCAGAGCAAAGTCGGTTTTGGGAAAGCACTAGGGATTTCAT...

CDS

Download CDS FASTA

1698 bp · TkA08G420500|TK1151|CDS

GTTTACACTCACTGGGAAGACATTTTTCCCAACGAGTACTGTCGTAATTGCTTGCTTGAAGCCCGTGATGATATCAACAACACATGCCCGTCGTCAAAAGATGCAGTATTTTGGAACGACGACTGCATGTTACGCTATGCTAACTACTCAATGCTGTCGATTATGGACTCCAACATTTTTCTGCATGAATGCAACGGTAATAATATTTCTGAAAAGGTATCAGAGCAAAGTCGGTTTTGGGAAAGCACTAGGGATTTCAT...

Protein

Download Protein FASTA

565 aa · TkA08G420500|TK1151|PROTEIN

VYTHWEDIFPNEYCRNCLLEARDDINNTCPSSKDAVFWNDDCMLRYANYSMLSIMDSNIFLHECNGNNISEKVSEQSRFWESTRDFMRGLAKKASKKSFAFGELRYSDNQTVYGYVQCTPDLSGFDCGQCLQVSVDGLGDYCHGKQGARVLTPSCNVRYETYKFLRFSSSGKNKFSTYIIAAIVATVGVLMVIVGMYVFMRKKRRGVAINELEEKIDDSDIITEDSLQFELRAIEAATNNISLDNKIGEGGFGGVYKGVL...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

Download Gene (CDS) Download Protein

ID Mapping

Input IDTkA08G420500
TK1151 IDTkA08G420500
OH-1004 IDLXL04_034665
Relationship / confidenceNon Reciprocal Best Hit / Complex relationship
Protein identity (%)96.500
Protein coverage (%)TK1151 100.000 / OH-1004 88.144
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA08G420500
LocationChr08:106899811-106909639 (-)
DescriptionSimilar to CRK15: Cysteine-rich receptor-like protein kinase 15
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At4g23180 Cysteine-rich receptor-like protein kinase 10. No verified direct reference in this release
At4g23230 Cysteine-rich receptor-like protein kinase 15. No verified direct reference in this release
At4g23160 Cysteine-rich receptor-like protein kinase 8. No verified direct reference in this release
At4g23270 Cysteine-rich receptor-like protein kinase 19. No verified direct reference in this release
At4g23280 Putative cysteine-rich receptor-like protein kinase 20. No verified direct reference in this release

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_034665 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0000302 response to reactive oxygen species Biological Process
GO:0006979 response to oxidative stress Biological Process
GO:0007165 signal transduction Biological Process
GO:0009626 plant-type hypersensitive response Biological Process
GO:0042742 defense response to bacterium Biological Process
GO:0005576 extracellular region Cellular Component
GO:0005829 cytosol Cellular Component
GO:0005886 plasma membrane Cellular Component
GO:0009507 chloroplast Cellular Component
GO:0004672 protein kinase activity Molecular Function
GO:0004674 protein serine/threonine kinase activity Molecular Function
GO:0005524 ATP binding Molecular Function
KEGG gene cross-reference
ath:AT4G05200
ath:AT4G23140
ath:AT4G23180
ath:AT4G23230
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cell membrane0.864
Rank 1 · TkA08G420500 · TK1151
Cytoplasm0.082
Rank 2 · TkA08G420500 · TK1151
Endoplasmic reticulum0.078
Rank 3 · TkA08G420500 · TK1151
Nucleus0.050
Rank 4 · TkA08G420500 · TK1151
Lysosome / Vacuole0.026
Rank 5 · TkA08G420500 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF01657Stress-antifung11-49 aa
PF31176LIN14_BEN45-95 aa
PF01657Stress-antifung64-162 aa
PF05568ASFV_J13L170-211 aa
PF17870Insulin_TMD179-203 aa
PF29119F13C5_C181-204 aa
PF11384DUF3188184-205 aa
PF26324HopBF1_kinase232-295 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA08G420500PF01657Stress-antifung11493.1e-2279.8
TkA08G420500PF31176LIN14_BEN45950.01715.6
TkA08G420500PF01657Stress-antifung641623.1e-2279.8
TkA08G420500PF05568ASFV_J13L1702110.2711.7
TkA08G420500PF17870Insulin_TMD1792030.01416.1
TkA08G420500PF29119F13C5_C1812040.07513.5
TkA08G420500PF11384DUF31881842050.7210.4
TkA08G420500PF26324HopBF1_kinase2322950.2211.8
TkA08G420500PF07714PK_Tyr_Ser-Thr2424424.5e-46158.0
TkA08G420500PF00069Pkinase2444452e-41142.8
TkA08G420500PF03109ABC12482710.0004820.1
TkA08G420500PF01636APH2653230.1912.2
TkA08G420500PF03109ABC13073900.0004820.1
TkA08G420500PF12330Haspin_kinase3513910.0314.1
TkA08G420500PF01636APH3573890.1912.2

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

ProteinOrganismDescriptionIdentityDatabaseConfidence
Q8GYA4Arabidopsis thalianasp|Q8GYA4|CRK10_ARATH Cysteine-rich receptor-like protein kinase 1047.900%Swiss-ProtMedium
Q8W4G6Arabidopsis thalianasp|Q8W4G6|CRK15_ARATH Cysteine-rich receptor-like protein kinase 1549.300%Swiss-ProtMedium
O65468Arabidopsis thalianasp|O65468|CRK8_ARATH Cysteine-rich receptor-like protein kinase 846.000%Swiss-ProtMedium
Q8GWJ7Arabidopsis thalianasp|Q8GWJ7|CRK19_ARATH Cysteine-rich receptor-like protein kinase 1946.200%Swiss-ProtMedium
O65479Arabidopsis thalianasp|O65479|CRK20_ARATH Putative cysteine-rich receptor-like protein kinase 2045.100%Swiss-ProtMedium

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