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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkA08G420100
Reference: TK1151 Chr: Chr08 Coordinates: 106813189-106817176 Strand: - Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

2140 bp · TkA08G420100|TK1151|cDNA

GTCTATATCTCCCTTGTCCTATGGATATATATAACCCAAAAGAAACTTTTAGAACTCCAGAGAAAGGCACATAAAACTTTCCATTTCGTCTCAAAAAGTATGTTTCTCGCCCTTCATTTTGTTTGGATCTCAGTTTTAACATCGACAGCCATTGCCGCTGAATTTCATACACATTACTGTGGTCACAACACAACCGACTACAGAAACACCAGTTACAATATAAACCGGATCCAACTCCTAGATTCACTTGTTTCAGTTAA...

CDS

Download CDS FASTA

2025 bp · TkA08G420100|TK1151|CDS

GTCTATATCTCCCTTGTCCTATGGATATATATAACCCAAAAGAAACTTTTAGAACTCCAGAGAAAGGCACATAAAACTTTCCATTTCGTCTCAAAAAGTATGTTTCTCGCCCTTCATTTTGTTTGGATCTCAGTTTTAACATCGACAGCCATTGCCGCTGAATTTCATACACATTACTGTGGTCACAACACAACCGACTACAGAAACACCAGTTACAATATAAACCGGATCCAACTCCTAGATTCACTTGTTTCAGTTAA...

Protein

Download Protein FASTA

674 aa · TkA08G420100|TK1151|PROTEIN

VYISLVLWIYITQKKLLELQRKAHKTFHFVSKSMFLALHFVWISVLTSTAIAAEFHTHYCGHNTTDYRNTSYNINRIQLLDSLVSVNDVNGTKFAYKSAGNSHPDIAYGVYLCREDVFPNEYCRNCLLEARDDINNTCPSSKDAVFWNDDCMLRYANYSMLSIMDSTIFLHECNGNNISEKVSEQSRFWESTRDFMRGLARKASKKTFAFGELRYSDNQTVYGYVQCTPDLSGFDCGRCLQVSVDGLGDYCHGKQGARVL...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

Download Gene (CDS) Download Protein

ID Mapping

Input IDTkA08G420100
TK1151 IDTkA08G420100
OH-1004 IDLXL04_034665
Relationship / confidenceRbh Below Probable Coverage Or Synteny Threshold / Review
Protein identity (%)98.900
Protein coverage (%)TK1151 95.104 / OH-1004 100.000
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA08G420100
LocationChr08:106813189-106817176 (-)
DescriptionSimilar to CRK15: Cysteine-rich receptor-like protein kinase 15
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At4g23230 Cysteine-rich receptor-like protein kinase 15. No verified direct reference in this release
At4g23180 Cysteine-rich receptor-like protein kinase 10. No verified direct reference in this release
At4g23280 Putative cysteine-rich receptor-like protein kinase 20. No verified direct reference in this release
At4g23160 Cysteine-rich receptor-like protein kinase 8. No verified direct reference in this release
At4g23270 Cysteine-rich receptor-like protein kinase 19. No verified direct reference in this release

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_034665 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0000302 response to reactive oxygen species Biological Process
GO:0006979 response to oxidative stress Biological Process
GO:0007165 signal transduction Biological Process
GO:0009626 plant-type hypersensitive response Biological Process
GO:0042742 defense response to bacterium Biological Process
GO:0005576 extracellular region Cellular Component
GO:0005829 cytosol Cellular Component
GO:0005886 plasma membrane Cellular Component
GO:0009507 chloroplast Cellular Component
GO:0004672 protein kinase activity Molecular Function
GO:0004674 protein serine/threonine kinase activity Molecular Function
GO:0005524 ATP binding Molecular Function
KEGG gene cross-reference
ath:AT4G05200
ath:AT4G23140
ath:AT4G23180
ath:AT4G23230
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cell membrane0.864
Rank 1 · TkA08G420100 · TK1151
Endoplasmic reticulum0.087
Rank 2 · TkA08G420100 · TK1151
Cytoplasm0.073
Rank 3 · TkA08G420100 · TK1151
Nucleus0.045
Rank 4 · TkA08G420100 · TK1151
Lysosome / Vacuole0.029
Rank 5 · TkA08G420100 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF30375OpgB_N5-51 aa
PF01657Stress-antifung60-158 aa
PF31176LIN14_BEN154-204 aa
PF01657Stress-antifung173-271 aa
PF30375OpgB_N283-313 aa
PF17870Insulin_TMD288-311 aa
PF29119F13C5_C290-312 aa
PF26324HopBF1_kinase341-404 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA08G420100PF30375OpgB_N5511.29.9
TkA08G420100PF01657Stress-antifung601581.2e-32113.2
TkA08G420100PF31176LIN14_BEN1542040.01116.2
TkA08G420100PF01657Stress-antifung1732711.2e-32113.2
TkA08G420100PF30375OpgB_N2833131.29.9
TkA08G420100PF17870Insulin_TMD2883110.03614.9
TkA08G420100PF29119F13C5_C2903120.1212.8
TkA08G420100PF26324HopBF1_kinase3414040.3211.3
TkA08G420100PF07714PK_Tyr_Ser-Thr3516172e-46159.1
TkA08G420100PF00069Pkinase3515572.9e-42145.6
TkA08G420100PF03109ABC13563800.0003820.4
TkA08G420100PF01636APH3764320.02615.0
TkA08G420100PF03109ABC14164980.0003820.4
TkA08G420100PF12330Haspin_kinase4605000.08612.6
TkA08G420100PF01636APH4664980.02615.0

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

ProteinOrganismDescriptionIdentityDatabaseConfidence
Q8W4G6Arabidopsis thalianasp|Q8W4G6|CRK15_ARATH Cysteine-rich receptor-like protein kinase 1547.900%Swiss-ProtMedium
Q8GYA4Arabidopsis thalianasp|Q8GYA4|CRK10_ARATH Cysteine-rich receptor-like protein kinase 1047.800%Swiss-ProtMedium
O65479Arabidopsis thalianasp|O65479|CRK20_ARATH Putative cysteine-rich receptor-like protein kinase 2045.300%Swiss-ProtMedium
O65468Arabidopsis thalianasp|O65468|CRK8_ARATH Cysteine-rich receptor-like protein kinase 844.800%Swiss-ProtMedium
Q8GWJ7Arabidopsis thalianasp|Q8GWJ7|CRK19_ARATH Cysteine-rich receptor-like protein kinase 1946.300%Swiss-ProtMedium

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