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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkA08G141970
Reference: TK1151 Chr: Chr08 Coordinates: 37022506-37023762 Strand: - Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

1227 bp · TkA08G141970|TK1151|cDNA

ATGGGTAAGTTGCTGGGACAAGGAACGTTTGCAAAGGTATACCACGCCAGGGACTCCGTCACGGCGGAGAGTGTCGCCGTTAAAGTGATTAAAACAGAGCAGGTAAGAAAGCAAGGTTTCATGGAGCAGATCACCCGTGAAATCGCCATCATGCGGCTCGTCCGCCACCCTAACGTCGTTCAACTGAAAGAAGTCATGGCTACCAAAACCAAGATCTTTCTGGTAATGGAGTACGTCAAAGGCGGGGAATTATTTGCTAA...

CDS

Download CDS FASTA

1227 bp · TkA08G141970|TK1151|CDS

ATGGGTAAGTTGCTGGGACAAGGAACGTTTGCAAAGGTATACCACGCCAGGGACTCCGTCACGGCGGAGAGTGTCGCCGTTAAAGTGATTAAAACAGAGCAGGTAAGAAAGCAAGGTTTCATGGAGCAGATCACCCGTGAAATCGCCATCATGCGGCTCGTCCGCCACCCTAACGTCGTTCAACTGAAAGAAGTCATGGCTACCAAAACCAAGATCTTTCTGGTAATGGAGTACGTCAAAGGCGGGGAATTATTTGCTAA...

Protein

Download Protein FASTA

408 aa · TkA08G141970|TK1151|PROTEIN

MGKLLGQGTFAKVYHARDSVTAESVAVKVIKTEQVRKQGFMEQITREIAIMRLVRHPNVVQLKEVMATKTKIFLVMEYVKGGELFAKIAKGRLKEDSARKYFQQLISAIDYCHSRGVSHRDLKPENLLLDENENLKISDFGLSALPEQLRNDGMLHTQCGTPAYVAPEVLRRKGYDGARADIWSCGVILYVLLAGCLPFQEVNIMHMYKKIFKAEYEFPPWFSADSRRLISKLLVVDPSQRITVPEIMRAPWLSKVFKTP...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

Download Gene (CDS) Download Protein

ID Mapping

Input IDTkA08G141970
TK1151 IDTkA08G141970
OH-1004 IDLXL04_032018
Relationship / confidenceRbh High Identity Coverage Synteny / Strict
Protein identity (%)97.600
Protein coverage (%)TK1151 100.000 / OH-1004 96.313
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA08G141970
LocationChr08:37022506-37023762 (-)
DescriptionSimilar to CIPK5: CBL-interacting serine/threonine-protein kinase 5
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At5g25110 CIPK serine-threonine protein kinases interact with CBL proteins. No verified direct reference in this release
At5g10930 CIPK serine-threonine protein kinases interact with CBL proteins. No verified direct reference in this release
At2g25090 CIPK serine-threonine protein kinases interact with CBL proteins. No verified direct reference in this release

Rice

Reference gene IDPossible functionPapers / DOI
Os09g0418000 CIPK serine-threonine protein kinases interact with CBL proteins. No verified direct reference in this release
Os07g0678600 CIPK serine-threonine protein kinases interact with CBL proteins. No verified direct reference in this release
Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_032018 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0001666 response to hypoxia Biological Process
GO:0006814 sodium ion transport Biological Process
GO:0007165 signal transduction Biological Process
GO:0030007 intracellular potassium ion homeostasis Biological Process
GO:0042538 hyperosmotic salinity response Biological Process
GO:0050832 defense response to fungus Biological Process
GO:0051592 response to calcium ion Biological Process
GO:0005634 nucleus Cellular Component
GO:0005794 Golgi apparatus Cellular Component
GO:0004674 protein serine/threonine kinase activity Molecular Function
GO:0005524 ATP binding Molecular Function
GO:0106310 protein serine kinase activity Molecular Function
KEGG gene cross-reference
ath:AT2G25090
ath:AT5G10930
ath:AT5G25110
dosa:Os07g0678600
dosa:Os09g0418000
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cytoplasm0.493
Rank 1 · TkA08G141970 · TK1151
Nucleus0.374
Rank 2 · TkA08G141970 · TK1151
Cell membrane0.256
Rank 3 · TkA08G141970 · TK1151
Endoplasmic reticulum0.054
Rank 4 · TkA08G141970 · TK1151
Golgi apparatus0.051
Rank 5 · TkA08G141970 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF07714PK_Tyr_Ser-Thr2-249 aa
PF14531Kinase-like2-55 aa
PF00069Pkinase3-253 aa
PF19250DUF58985-126 aa
PF03109ABC18-33 aa
PF01163RIO126-141 aa
PF01636APH39-108 aa
PF03109ABC165-144 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA08G141970PF07714PK_Tyr_Ser-Thr22492.7e-40139.0
TkA08G141970PF14531Kinase-like2551.2e-0628.8
TkA08G141970PF00069Pkinase32539.5e-78261.9
TkA08G141970PF19250DUF589851260.1812.5
TkA08G141970PF03109ABC18332.1e-0731.1
TkA08G141970PF01163RIO1261410.0002621.4
TkA08G141970PF01636APH391080.002918.1
TkA08G141970PF03109ABC1651442.1e-0731.1
TkA08G141970PF06293Kdo651360.001518.7
TkA08G141970PF12330Haspin_kinase691460.02114.6
TkA08G141970PF14531Kinase-like952031.2e-0628.8
TkA08G141970PF01636APH1151340.002918.1
TkA08G141970PF02992Transposase_211952390.02314.6
TkA08G141970PF03822NAF2773322.6e-1866.6
TkA08G141970PF12330Haspin_kinase3043750.02114.6

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

ProteinOrganismDescriptionIdentityDatabaseConfidence
Q8W1D5Arabidopsis thalianasp|Q8W1D5|CIPKP_ARATH CBL-interacting serine/threonine-protein kinase 2564.600%Swiss-ProtHigh
Q9LEU7Arabidopsis thalianasp|Q9LEU7|CIPK5_ARATH CBL-interacting serine/threonine-protein kinase 562.400%Swiss-ProtHigh
Q9SEZ7Arabidopsis thalianasp|Q9SEZ7|CIPKG_ARATH CBL-interacting serine/threonine-protein kinase 1658.900%Swiss-ProtHigh
Q6ERS4Oryza sativa subsp. japonicasp|Q6ERS4|CIPKG_ORYSJ CBL-interacting protein kinase 1658.600%Swiss-ProtHigh
Q7X996Oryza sativa subsp. japonicasp|Q7X996|CIPK2_ORYSJ CBL-interacting protein kinase 259.000%Swiss-ProtHigh

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