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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkA08G125190
Reference: TK1151 Chr: Chr08 Coordinates: 32516371-32518797 Strand: - Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

2350 bp · TkA08G125190|TK1151|cDNA

TTAAAAAATAAGTATGAAACCTTCATTCATAAATCATAAATGATGAAAAGGGATGGGGGGCACCCTACCCCTCTTCTCTTTACAAAACCTTCACGTGATCCTGACTCTGTTTCTTTTTAGTAACCATTACGGCACCGCACCAACATCTTCTTCTTCATTTGCCCTCTGCAACTGCCACTAAAACTCCATGGCTTCAGCAACAACAAGCTCACATCTCCGTCAATTCTAAATTCACATCCATTAATTCCACGATGAAGTCA...

CDS

Download CDS FASTA

1923 bp · TkA08G125190|TK1151|CDS

ATGAAGTCAACCTTCATTCACAATGCCATACTTTACCTCACATTCTTGACTATTATAACTTTGGCGGCAACGAATCAGAATTCCCATGATGACGCTATGTCGTTGTTAGCCTTCAACTCTGCAGCAGATACCGGTAATAATCTTGGCTACTCAGTCCAAAAGAGTTCCGATGTCTGTAAATGGCAGGGAGTACAATGCCACATCAACGGCAAGGTAATCCGACTTGTTCTTGACAACTTGAGCCTCGCCGGAGTTTTTGC...

Protein

Download Protein FASTA

640 aa · TkA08G125190|TK1151|PROTEIN

MKSTFIHNAILYLTFLTIITLAATNQNSHDDAMSLLAFNSAADTGNNLGYSVQKSSDVCKWQGVQCHINGKVIRLVLDNLSLAGVFAANTLTRMEQLRVLSLRNNSLAGPIPDLSELVNLKSLLLDHNYFTGGIPSSIPSLHRLRSLDLSHNKLSGVIPVELRKLDRLSYLRLDSNHLNGSIPPLNQSSLQTFNVSDNLLTGPVPVTPTLARFGPDLFSINPGLCGLIVRIECGISGQFFGKHSPSSSTPGRGKSGQLQP...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

Download Gene (CDS) Download Protein

ID Mapping

Input IDTkA08G125190
TK1151 IDTkA08G125190
OH-1004 IDLXL04_008092
Relationship / confidenceRbh Below Probable Coverage Or Synteny Threshold / Review
Protein identity (%)62.900
Protein coverage (%)TK1151 99.062 / OH-1004 98.797
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA08G125190
LocationChr08:32516371-32518797 (-)
DescriptionSimilar to At5g67200: Probable inactive receptor kinase At5g67200
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At5g67200 Probable inactive receptor kinase At5g67200. No verified direct reference in this release
At1g60630 Inactive leucine-rich repeat receptor-like serine/threonine-protein kinase At1g60630. No verified direct reference in this release
At5g35390 Receptor-like kinase involved in the control of pollen germination and pollen tube polar growth.
AtPRK2 promotes ROP1 activation via RopGEFs in the control of polarized pollen tube growth.2013 · DOI: 10.1093/mp/sss103
At1g68400 Probable leucine-rich repeat receptor-like protein kinase At1g68400. No verified direct reference in this release
At1g48480 Probable inactive receptor kinase At1g48480. No verified direct reference in this release

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_008092 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:2000605 positive regulation of secondary growth Biological Process
GO:0005777 peroxisome Cellular Component
GO:0005886 plasma membrane Cellular Component
GO:0009505 plant-type cell wall Cellular Component
GO:0009507 chloroplast Cellular Component
GO:0016020 membrane Cellular Component
GO:0004672 protein kinase activity Molecular Function
GO:0004674 protein serine/threonine kinase activity Molecular Function
GO:0005524 ATP binding Molecular Function
GO:0106310 protein serine kinase activity Molecular Function
KEGG gene cross-reference
ath:AT1G60630
ath:AT1G68400
ath:AT2G26730
ath:AT5G05160
ath:AT5G67200
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cell membrane0.875
Rank 1 · TkA08G125190 · TK1151
Endoplasmic reticulum0.075
Rank 2 · TkA08G125190 · TK1151
Cytoplasm0.075
Rank 3 · TkA08G125190 · TK1151
Nucleus0.062
Rank 4 · TkA08G125190 · TK1151
Lysosome / Vacuole0.019
Rank 5 · TkA08G125190 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF12799LRR_413-26 aa
PF08263LRRNT_230-66 aa
PF13855LRR_886-129 aa
PF25019LRR_R13L1-DRL2191-126 aa
PF00560LRR_196-113 aa
PF12799LRR_496-128 aa
PF08263LRRNT_2117-128 aa
PF25019LRR_R13L1-DRL21117-174 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA08G125190PF12799LRR_413268.3e-0729.8
TkA08G125190PF08263LRRNT_230660.07114.1
TkA08G125190PF13855LRR_8861295.1e-1246.1
TkA08G125190PF25019LRR_R13L1-DRL21911260.1712.5
TkA08G125190PF00560LRR_1961139e-1449.4
TkA08G125190PF12799LRR_4961288.3e-0729.8
TkA08G125190PF08263LRRNT_21171280.07114.1
TkA08G125190PF25019LRR_R13L1-DRL211171740.1712.5
TkA08G125190PF00560LRR_11191419e-1449.4
TkA08G125190PF13855LRR_81191785.1e-1246.1
TkA08G125190PF00560LRR_11431659e-1449.4
TkA08G125190PF12799LRR_41431868.3e-0729.8
TkA08G125190PF12799LRR_41672008.3e-0729.8
TkA08G125190PF00560LRR_11681849e-1449.4
TkA08G125190PF13855LRR_81882015.1e-1246.1
TkA08G125190PF00560LRR_11892059e-1449.4

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

ProteinOrganismDescriptionIdentityDatabaseConfidence
Q93Y06Arabidopsis thalianasp|Q93Y06|Y5720_ARATH Probable inactive receptor kinase At5g6720051.200%Swiss-ProtHigh
Q84MA9Arabidopsis thalianasp|Q84MA9|Y1063_ARATH Inactive leucine-rich repeat receptor-like serine/threonine-protein kinase At1g6063044.200%Swiss-ProtMedium
C0LGU0Arabidopsis thalianasp|C0LGU0|PRK1_ARATH Pollen receptor-like kinase 133.200%Swiss-ProtMedium
Q9M9C5Arabidopsis thalianasp|Q9M9C5|Y1680_ARATH Probable leucine-rich repeat receptor-like protein kinase At1g6840035.700%Swiss-ProtMedium
Q9LP77Arabidopsis thalianasp|Q9LP77|Y1848_ARATH Probable inactive receptor kinase At1g4848035.600%Swiss-ProtMedium

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