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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkA08G113680
Reference: TK1151 Chr: Chr08 Coordinates: 29589163-29591291 Strand: - Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

1885 bp · TkA08G113680|TK1151|cDNA

AAGGATCTGAATTCATAAGTTTTTATCAAACATAAAAACATTTTTGCAGTCTACTATTTTATCTTACATATCATTGTTAAACGAGCGACTAAATTGTTACAAGTTTAACGGCAACGAACTCTTTGATAAGCTCGTGAAATGGCGGTTTTCTGATGGCGACCAGATAACGAATCCTACTTTATTGTGCCCATGTTTTCTGGAAGATCCAATTTCATTTATTTCCTCTGTCTATAACTCCTCCCAGATACGTAAAATTCAAG...

CDS

Download CDS FASTA

1125 bp · TkA08G113680|TK1151|CDS

ATGGCGACCCCAGTTGAACCTCCAAGCGGGATTAGAACAGAAGGGAAGCATTACTTTTCTATATGCCAAGCATTATTCGAATTAGATACAAAATACGTTCCTATAAAGCCAATTGGTCGAGGGGCATATGGTATTGTGTGTTCTTCATTTAACAGGCAAACCAATGAAAAAGTCGCAATCAAAAAGATCCACAATACGTTTGATAACCATACGGATGCCCTAAGAAGCTTACGTGAACTCAAACTTCTTCGACATCTTCG...

Protein

Download Protein FASTA

374 aa · TkA08G113680|TK1151|PROTEIN

MATPVEPPSGIRTEGKHYFSICQALFELDTKYVPIKPIGRGAYGIVCSSFNRQTNEKVAIKKIHNTFDNHTDALRSLRELKLLRHLRHENVIALKDVMVPMHKTSFKDVYLVYELMDTDLHQIIKSSQSLSNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLINANCDLKICDFGLARTNNSKDQFMTEYVVTRWYRAPELLLCCENYGTSIDIWSVGCIFAELLGRKPLFPGTECLNQLRLIINILGSQMEEEIEF...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA08G113680
TK1151 IDTkA08G113680
OH-1004 IDLXL04_030499
Relationship / confidenceNon Reciprocal Best Hit / Complex relationship
Protein identity (%)82.900
Protein coverage (%)TK1151 98.663 / OH-1004 100.000
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA08G113680
LocationChr08:29589163-29591291 (-)
DescriptionSimilar to NTF3: Mitogen-activated protein kinase homolog NTF3
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At2g18170 MKK3-MPK7 module acts as a positive regulator of PR1 gene expression.
The Arabidopsis mitogen-activated protein kinase kinase MKK3 is upstream of group C mitogen-activated protein kinases and participates in pathogen signaling.2007 · DOI: 10.1105/tpc.106.050039
At1g59580 Mitogen-activated protein kinase 2. No verified direct reference in this release

Rice

Reference gene IDPossible functionPapers / DOI
Os06g0699400 Mitogen-activated protein kinase 4. No verified direct reference in this release
Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_030499 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0007165 signal transduction Biological Process
GO:0009734 auxin-activated signaling pathway Biological Process
GO:0035556 intracellular signal transduction Biological Process
GO:0005634 nucleus Cellular Component
GO:0005737 cytoplasm Cellular Component
GO:0004672 protein kinase activity Molecular Function
GO:0004674 protein serine/threonine kinase activity Molecular Function
GO:0004707 MAP kinase activity Molecular Function
GO:0005524 ATP binding Molecular Function
GO:0016301 kinase activity Molecular Function
GO:0106310 protein serine kinase activity Molecular Function
KEGG gene cross-reference
ath:AT1G10210
dosa:Os02g0148100
dosa:Os06g0699400
osa:4328297
osa:4341956
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cytoplasm0.612
Rank 1 · TkA08G113680 · TK1151
Nucleus0.580
Rank 2 · TkA08G113680 · TK1151
Cell membrane0.065
Rank 3 · TkA08G113680 · TK1151
Mitochondrion0.050
Rank 4 · TkA08G113680 · TK1151
Endoplasmic reticulum0.032
Rank 5 · TkA08G113680 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF00069Pkinase33-319 aa
PF07714PK_Tyr_Ser-Thr36-228 aa
PF03109ABC153-70 aa
PF25505ARM_CPL356-120 aa
PF06293Kdo64-173 aa
PF01636APH72-152 aa
PF17482Phage_sheath_1C87-127 aa
PF03109ABC191-188 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA08G113680PF00069Pkinase333193.7e-70237.0
TkA08G113680PF07714PK_Tyr_Ser-Thr362286.1e-32111.6
TkA08G113680PF03109ABC153701.4e-0525.1
TkA08G113680PF25505ARM_CPL3561200.1312.9
TkA08G113680PF06293Kdo641731.1e-0629.0
TkA08G113680PF01636APH721520.02714.9
TkA08G113680PF17482Phage_sheath_1C871270.04314.6
TkA08G113680PF03109ABC1911881.4e-0525.1
TkA08G113680PF12330Haspin_kinase1031880.0002820.8
TkA08G113680PF14531Kinase-like1122040.05913.3
TkA08G113680PF13095FTA21351790.1112.9
TkA08G113680PF17667Pkinase_fungal1431800.06712.6
TkA08G113680PF01636APH1541800.02714.9
TkA08G113680PF17482Phage_sheath_1C1551960.04314.6
TkA08G113680PF17482Phage_sheath_1C2442850.04314.6
TkA08G113680PF00069Pkinase3403683.7e-70237.0

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

ProteinOrganismDescriptionIdentityDatabaseConfidence
Q39027Arabidopsis thalianasp|Q39027|MPK7_ARATH Mitogen-activated protein kinase 776.800%Swiss-ProtHigh
Q39022Arabidopsis thalianasp|Q39022|MPK2_ARATH Mitogen-activated protein kinase 275.900%Swiss-ProtHigh
Q5Z859Oryza sativa subsp. japonicasp|Q5Z859|MPK4_ORYSJ Mitogen-activated protein kinase 477.500%Swiss-ProtHigh

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