How to use this page

Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp

Gene overview

TkA08G064710
Reference: TK1151 Chr: Chr08 Coordinates: 16502259-16503316 Strand: + Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

896 bp · TkA08G064710|TK1151|cDNA

AAGCAAACAAAAAATTGAATTATGACAAATCATAATATCGAAAATTGTTATGGAAGTAATTCAAAAGCATTTGTAATGCCTCTCGTTAACCCTTGAATTCCCTCCCTTTACTTTCTTTAAAACAGAGCCGAGTATCGGATTGGTAGCAATACAATTTGTTCAGGTGGGGAAAAGAAGAAAAGCTAAACTGAAATTAACTCACCGCCCATCGCCTCACCTGCGCCACCGGCGGCGGCGCGCCGATTGTTTTTTTCGTTTAC...

612 bp · TkA08G064710|TK1151|CDS

ATGTCACTTGCACTCGAAGATTTTTTGTCCTCATCATCGTCCTCCACACAACGTTCGTTTTTCCAAAACCCTAACCCTAGCGCTCAGGGACATTTTACTGATTCAGGTGATACTACTGGTTTTGTGTTCAATGCGACTACTAGTGGTTCAGTGTTAAGCTCGAGTTTAGGGCAAACGGGATGCGATGGAAATGGTGAACGACGGCGTGATGGTGAGGTTTTGGATGCTAATCTATTGCGCTTTACTATGGGAGCCGGTAA...

204 aa · TkA08G064710|TK1151|PROTEIN

MSLALEDFLSSSSSSTQRSFFQNPNPSAQGHFTDSGDTTGFVFNATTSGSVLSSSLGQTGCDGNGERRRDGEVLDANLLRFTMGAGNGKLGNKMGSEEVHNSTNSFQPDRTNFVFGAGDKKADSRKASENVANKFGKLNGMDFVFGMKLNNGVGNSSSSNIGHESGPDGVAFHASDSESSGAVGRSGINEFMKVKNFTTMADSH

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

Download Gene (CDS) Download Protein

ID Mapping

Input IDTkA08G064710
TK1151 IDTkA08G064710
OH-1004 IDLXL04_018499
Relationship / confidenceNon Reciprocal Best Hit / Complex relationship
Protein identity (%)76.100
Protein coverage (%)TK1151 100.000 / OH-1004 23.354
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA08G064710
LocationChr08:16502259-16503316 (+)
DescriptionSimilar to DNAJC7: DnaJ homolog subfamily C member 7
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

No hit for this species in the current source table.

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_018499 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0006457 protein folding Biological Process
GO:0006970 response to osmotic stress Biological Process
GO:1900034 regulation of cellular response to heat Biological Process
GO:0005634 nucleus Cellular Component
GO:0005654 nucleoplasm Cellular Component
GO:0005737 cytoplasm Cellular Component
GO:0005829 cytosol Cellular Component
GO:0005856 cytoskeleton Cellular Component
GO:0016020 membrane Cellular Component
GO:0045335 phagocytic vesicle Cellular Component
GO:0070062 extracellular exosome Cellular Component
GO:0001671 ATPase activator activity Molecular Function
KEGG gene cross-reference
ath:AT3G58620
ddi:DDB_G0288639
hsa:7266
mmu:56354
pon:100173101
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Nucleus0.886
Rank 1 · TkA08G064710 · TK1151
Cytoplasm0.162
Rank 2 · TkA08G064710 · TK1151
Cell membrane0.041
Rank 3 · TkA08G064710 · TK1151
Endoplasmic reticulum0.035
Rank 4 · TkA08G064710 · TK1151
Plastid0.017
Rank 5 · TkA08G064710 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Predicted Functional Domains

No result was found for this query.

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

No result was found for this query.

JBrowse

View in Genome Browser