Gene Card
Gene overview
cDNA / CDS / Protein Sequences
316 bp · TkA08G062710|TK1151|cDNA
GACATTCTCTCCACTATAAACACACCCCACAAATCCCAAATACACTTTCAAAACTTCTCCCCAGCTTTACCTTCCTCATCTAATCTTCCCCACATAAACATGTCTCTTGGCAAAGACAACATGAACCCCATTCCCATACATAACGACACCATCCATGATGGCATGGTGATGCACATGAGTTTCTTTTGGAGCAAAGATGTTGTGATGTTAATCAACGGTTGGCCAAACGGGAAACTAGTTCATAAAAATGAAGAAGAAGA...
303 bp · TkA08G062710|TK1151|CDS
GACATTCTCTCCACTATAAACACACCCCACAAATCCCAAATACACTTTCAAAACTTCTCCCCAGCTTTACCTTCCTCATCTAATCTTCCCCACATAAACATGTCTCTTGGCAAAGACAACATGAACCCCATTCCCATACATAACGACACCATCCATGATGGCATGGTGATGCACATGAGTTTCTTTTGGAGCAAAGATGTTGTGATGTTAATCAACGGTTGGCCAAACGGGAAACTAGTTCATAAAAATGAAGAAGAAGA...
Protein
Download Protein FASTA100 aa · TkA08G062710|TK1151|PROTEIN
DILSTINTPHKSQIHFQNFSPALPSSSNLPHINMSLGKDNMNPIPIHNDTIHDGMVMHMSFFWSKDVVMLINGWPNGKLVHKNEEEEGRHAALMSNERVQ
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkA08G062710 |
|---|---|
| TK1151 ID | TkA08G062710 |
| OH-1004 ID | LXL04_018461 |
| Relationship / confidence | Rbh Below Probable Coverage Or Synteny Threshold / Review |
| Protein identity (%) | 100.000 |
| Protein coverage (%) | TK1151 47.000 / OH-1004 38.843Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkA08G062710 |
|---|---|
| Location | Chr08:16018891-16019912 (-) |
| Description | Similar to COPT3: Copper transporter 3 |
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene ArabidopsisNo hit for this species in the current source table. RiceNo hit for this species in the current source table. |
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · |
| GO annotations (OH1004 source) | GO:0006825 copper ion transport Biological Process GO:0035434 copper ion transmembrane transport Biological Process GO:0048235 pollen sperm cell differentiation Biological Process GO:0048364 root development Biological Process GO:0098705 copper ion import across plasma membrane Biological Process GO:0000325 plant-type vacuole Cellular Component GO:0005886 plasma membrane Cellular Component GO:0016020 membrane Cellular Component GO:0005375 copper ion transmembrane transporter activity Molecular Function GO:0015089 high-affinity copper ion transmembrane transporter activity Molecular Function |
| KEGG gene cross-reference | ath:AT2G26975 ath:AT3G46900 ath:AT5G59030 ath:AT5G59040 dosa:Os04g0415600 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
No result was found for this query.
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
No result was found for this query.