Gene Card
Gene overview
cDNA / CDS / Protein Sequences
1447 bp · TkA07G445260|TK1151|cDNA
AAATTAATTAACCAAGTGCGGGAGTCAAGTGATAGAAAGTCGTACACCAGTCACAAATATTGAAGAGCACACAAGCCACTGAAAATCGAAGAGCGGGCGATCGGAGAAAATCCTAGTCGCCGCACATACCTCCTACTCCTCTTTCTCTTCGAATTTCTTTCCACGAAAGGAAGAAACGAAGCAAAAAGGGAGGGATGTCAGACCTAGACCGGCAAATCGAGCAGCTGAAGAACTGTGAACCACTAAAAGAGTCTGAAGTA...
918 bp · TkA07G445260|TK1151|CDS
ATGTCAGACCTAGACCGGCAAATCGAGCAGCTGAAGAACTGTGAACCACTAAAAGAGTCTGAAGTAAAGGCTCTCTGCTTGAAAGCCATGGAAATTCTCGTCGAGGAGAGCAACGTCCAAAGGGTCGATGCTCCTGTCACTATATGTGGTGACATCCATGGGCAGTTTTATGACATGAAAGAGCTATTTAAAGTAGGTGGTGATTGCCCAAAGACTAACTACTTGTTTCTTGGAGACTTTGTTGATAGAGGCTTCTATTC...
Protein
Download Protein FASTA305 aa · TkA07G445260|TK1151|PROTEIN
MSDLDRQIEQLKNCEPLKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHGGLSPNINTLDQIRTIDRKQEVPHDGAMCDLLWSDPEDIVDGWGLSPRGAGFLFGGSVVTSFNHANNIDYICRAHQLVMEGFKWMFNNQIVTVWSAPNY...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkA07G445260 |
|---|---|
| TK1151 ID | TkA07G445260 |
| OH-1004 ID | LXL04_025230 |
| Relationship / confidence | Non Reciprocal Best Hit / Complex relationship |
| Protein identity (%) | 65.800 |
| Protein coverage (%) | TK1151 99.672 / OH-1004 98.693Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkA07G445260 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Location | Chr07:112970721-112974044 (-) | |||||||||
| Description | Similar to PP2A2: Serine/threonine-protein phosphatase PP2A-2 catalytic subunit | |||||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
RiceNo hit for this species in the current source table. | |||||||||
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | |||||||||
| GO annotations (OH1004 source) | GO:0000278 mitotic cell cycle Biological Process GO:0006470 protein dephosphorylation Biological Process GO:0009738 abscisic acid-activated signaling pathway Biological Process GO:0009788 negative regulation of abscisic acid-activated signaling pathway Biological Process GO:0009903 chloroplast avoidance movement Biological Process GO:0032000 positive regulation of fatty acid beta-oxidation Biological Process GO:2000012 regulation of auxin polar transport Biological Process GO:0005634 nucleus Cellular Component GO:0005737 cytoplasm Cellular Component GO:0005777 peroxisome Cellular Component GO:0005829 cytosol Cellular Component GO:0005886 plasma membrane Cellular Component | |||||||||
| KEGG gene cross-reference | ath:AT1G10430 ath:AT1G59830 ath:AT1G69960 dosa:Os06g0574500 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF16891STPPase_N16-36 aaPF00149Metallophos45-239 aaPF11564BpuJI_N132-156 aaPF16891STPPase_N227-234 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| TkA07G445260 | PF16891 | STPPase_N | 16 | 36 | 0.0036 | 18.4 |
| TkA07G445260 | PF00149 | Metallophos | 45 | 239 | 1.1e-48 | 167.0 |
| TkA07G445260 | PF11564 | BpuJI_N | 132 | 156 | 0.25 | 11.3 |
| TkA07G445260 | PF16891 | STPPase_N | 227 | 234 | 0.0036 | 18.4 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.