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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkA07G109500
Reference: TK1151 Chr: Chr07 Coordinates: 28356366-28361464 Strand: - Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

2206 bp · TkA07G109500|TK1151|cDNA

CCACCCAGTCTCGCAATTACTCGTAAACTTAAAATGAGGGATTTGGGCTTTTCCAAAAGATAGGTATAGCCGCCTTTTACAAACAACTCATCCGCGCAGTCTCGCAATTACCGAACACGCTCGACACATCTGCGATTCATCTCCGTCTGCTCGACATCTGCGACTCATCAGACATCTGCCCTCTGTATCCATCTTCAAAGCGCCATTAATGCCTTCGACCTACCTCTGAAGCGAACCCCATCCACCCGCCTCCATCTCCT...

CDS

Download CDS FASTA

1434 bp · TkA07G109500|TK1151|CDS

ATGTTGGCATTTGGATCCATGATTGGTAGGAAGTTTTCATCCGCTACTTCTCATCCATTGCGTGTTTGTGTGGTCGGCAGTGGTCCCGCCGGTTTTTACACCGCCGAAAAGATGTTGAAAGCACATGAAGGAGCAGAAGTTGACATCGTTGATAGACTCCCAACACCATTTGGATTGGTCCGTTCTGGTGTAGCTCCCGATCACCCTGAAACCAAGATTGTCATCAACCAATTCTCACGTGTTGCACATGACCAACGATG...

Protein

Download Protein FASTA

477 aa · TkA07G109500|TK1151|PROTEIN

MLAFGSMIGRKFSSATSHPLRVCVVGSGPAGFYTAEKMLKAHEGAEVDIVDRLPTPFGLVRSGVAPDHPETKIVINQFSRVAHDQRCSFFGNVSLGSSVSLSDLRQFYHVVVLAYGAESDRALGIPGEELKGIHSAREFVWWYNGHPDLSNMTLDLKNTDTAIVLGQGNVALDVARILLRSPAELATTDIATHALDALRESSIRKVYLVGRRGPVQAACTAKELREILAIKDLHINIKEADLVKNPADEEEMKNSRIRKR...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA07G109500
TK1151 IDTkA07G109500
OH-1004 IDLXL04_027959
Relationship / confidenceRbh High Identity Coverage Synteny / Strict
Protein identity (%)98.500
Protein coverage (%)TK1151 100.000 / OH-1004 81.818
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA07G109500
LocationChr07:28356366-28361464 (-)
DescriptionSimilar to MFDR: NADPH:adrenodoxin oxidoreductase, mitochondrial
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At4g32360 Associates in vitro with the adrenodoxin-like protein MFDX1 to form an efficient low potential electron transfer chain that is able to reduce cytochrome C.
Identification and molecular characterization of mitochondrial ferredoxins and ferredoxin reductase from Arabidopsis.2003 · DOI: 10.1023/a:1025015811141

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_027959 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0006091 generation of precursor metabolites and energy Biological Process
GO:0006124 ferredoxin metabolic process Biological Process
GO:0006694 steroid biosynthetic process Biological Process
GO:0006744 ubiquinone biosynthetic process Biological Process
GO:0008203 cholesterol metabolic process Biological Process
GO:0009102 biotin biosynthetic process Biological Process
GO:0022900 electron transport chain Biological Process
GO:0005739 mitochondrion Cellular Component
GO:0005743 mitochondrial inner membrane Cellular Component
GO:0005759 mitochondrial matrix Cellular Component
GO:0005886 plasma membrane Cellular Component
GO:0004324 ferredoxin-NADP+ reductase activity Molecular Function
KEGG gene cross-reference
ath:AT4G32360
bta:282604
hsa:2232
rno:79122
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Mitochondrion0.744
Rank 1 · TkA07G109500 · TK1151
Cytoplasm0.237
Rank 2 · TkA07G109500 · TK1151
Nucleus0.139
Rank 3 · TkA07G109500 · TK1151
Peroxisome0.038
Rank 4 · TkA07G109500 · TK1151
Plastid0.035
Rank 5 · TkA07G109500 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF13241NAD_binding_720-52 aa
PF07992Pyr_redox_221-209 aa
PF01494FAD_binding_321-64 aa
PF00070Pyr_redox21-56 aa
PF03486HI0933_like21-53 aa
PF027373HCDH_N22-52 aa
PF05834Lycopene_cycl22-54 aa
PF13450NAD_binding_824-68 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA07G109500PF13241NAD_binding_720520.0514.9
TkA07G109500PF07992Pyr_redox_2212091.9e-0938.1
TkA07G109500PF01494FAD_binding_321640.002218.0
TkA07G109500PF00070Pyr_redox21560.01816.3
TkA07G109500PF03486HI0933_like21530.01915.2
TkA07G109500PF027373HCDH_N22520.003318.1
TkA07G109500PF05834Lycopene_cycl22540.1312.0
TkA07G109500PF13450NAD_binding_824681.1e-0526.4
TkA07G109500PF13454NAD_binding_924590.01915.6
TkA07G109500PF13241NAD_binding_71551870.0514.9
TkA07G109500PF00070Pyr_redox1621800.01816.3
TkA07G109500PF027373HCDH_N1632680.003318.1
TkA07G109500PF05834Lycopene_cycl2442930.1312.0
TkA07G109500PF03486HI0933_like2623080.01915.2
TkA07G109500PF07992Pyr_redox_23053671.9e-0938.1
TkA07G109500PF13241NAD_binding_73974160.0514.9

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

ProteinOrganismDescriptionIdentityDatabaseConfidence
Q8W3L1Arabidopsis thalianasp|Q8W3L1|MFDR_ARATH NADPH:adrenodoxin oxidoreductase, mitochondrial69.600%Swiss-ProtHigh

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