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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkA07G067640
Reference: TK1151 Chr: Chr07 Coordinates: 17765919-17770395 Strand: - Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

2283 bp · TkA07G067640|TK1151|cDNA

CTCTATTGTAAGAACGACAAAAACAAAATTTAACATTTTGTATACACCAATTTAGAAGTTATAGGTTTATACAGGGGAAGTATTCATGCGAATGCCCTATGAAATTCAAGCAACCAAATTTATCACGATTCACGCCATTCAATTATTGTGATTTCTGTGTGCGTCAACCCTCTTCCTCCTCCGTTTTTACCATCCAGATCAAGATTTCCAAAACCCCCCATTTCCCCAAATTTGGCATGCCGAAAATCCTTTGATTTTCC...

CDS

Download CDS FASTA

1359 bp · TkA07G067640|TK1151|CDS

ATGTCGTCGTCGCGACCTTCGAGGACGAGAGTCGGTAGGTATGAGCTCGGAAGGACGCTTGGGGAAGGGACGTTTGCGAAGGTGAAGTTCGCTAGAAATGTTGAAACAGGTGAGAATGTCGCCATTAAGATTCTCGATAAGGAGAAAGTTCTCAAGCATAAGATGATCACTCAGATCAAACGGGAGATATCAACAATGAAATTGATCAGACACCCAAATGTCATCCGAATGCATGAGGTTATGGCGAGCAAGACAAAAAT...

Protein

Download Protein FASTA

452 aa · TkA07G067640|TK1151|PROTEIN

MSSSRPSRTRVGRYELGRTLGEGTFAKVKFARNVETGENVAIKILDKEKVLKHKMITQIKREISTMKLIRHPNVIRMHEVMASKTKIYIVLEFVTGGELFDKIATKGRLKEDEARKYFQQLINAVDYCHSRGVFHRDLKPENLLLDATGCLKVSDFGLSALPQQVREDGLLHTTCGTPNYVAPEVINNKGYDGAQADLWSCGVILFVLMAGYLPFEESNLMALYKKIHKAEFSCPPWFSSSAKKLIKRILDPNPVTRITT...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA07G067640
TK1151 IDTkA07G067640
OH-1004 IDLXL04_018244
Relationship / confidenceNon Reciprocal Best Hit / Complex relationship
Protein identity (%)60.700
Protein coverage (%)TK1151 94.469 / OH-1004 94.866
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA07G067640
LocationChr07:17765919-17770395 (-)
DescriptionSimilar to CIPK24: CBL-interacting serine/threonine-protein kinase 24
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At1g30270 CIPK serine-threonine protein kinases interact with CBL proteins.
A protein kinase, interacting with two calcineurin B-like proteins, regulates K+ transporter AKT1 in Arabidopsis.2006 · DOI: 10.1016/j.cell.2006.06.011
A Ca(2)+ signaling pathway regulates a K(+) channel for low-K response in Arabidopsis.2006 · DOI: 10.1073/pnas.0605129103
A protein phosphorylation/dephosphorylation network regulates a plant potassium channel.2007 · DOI: 10.1073/pnas.0707912104
Two calcineurin B-like calcium sensors, interacting with protein kinase CIPK23, regulate leaf transpiration and root potassium uptake in Arabidopsis.2007 · DOI: 10.1111/j.1365-313x.2007.03236.x
At1g01140 CIPK serine-threonine protein kinases interact with CBL proteins.
A protein kinase, calcineurin B-like protein-interacting protein Kinase9, interacts with calcium sensor calcineurin B-like Protein3 and regulates potassium homeostasis under low-potassium stress in Arabidopsis.2013 · DOI: 10.1104/pp.112.206896

Rice

Reference gene IDPossible functionPapers / DOI
Os07g0150700 CIPK serine-threonine protein kinases interact with CBL proteins. No verified direct reference in this release
Os12g0132200 CIPK serine-threonine protein kinases interact with CBL proteins. No verified direct reference in this release
Os03g0126800 CIPK serine-threonine protein kinases interact with CBL proteins. No verified direct reference in this release
Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_018244 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0006468 protein phosphorylation Biological Process
GO:0007165 signal transduction Biological Process
GO:0007584 response to nutrient Biological Process
GO:0009414 response to water deprivation Biological Process
GO:0009651 response to salt stress Biological Process
GO:0009749 response to glucose Biological Process
GO:0010118 stomatal movement Biological Process
GO:0010119 regulation of stomatal movement Biological Process
GO:0010167 response to nitrate Biological Process
GO:0046777 protein autophosphorylation Biological Process
GO:0048364 root development Biological Process
GO:1990573 potassium ion import across plasma membrane Biological Process
KEGG gene cross-reference
ath:AT1G30270
ath:AT4G24400
ath:AT5G35410
dosa:Os01g0536000
dosa:Os06g0606000
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cytoplasm0.519
Rank 1 · TkA07G067640 · TK1151
Nucleus0.442
Rank 2 · TkA07G067640 · TK1151
Cell membrane0.266
Rank 3 · TkA07G067640 · TK1151
Golgi apparatus0.047
Rank 4 · TkA07G067640 · TK1151
Endoplasmic reticulum0.046
Rank 5 · TkA07G067640 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF00069Pkinase14-269 aa
PF07714PK_Tyr_Ser-Thr15-265 aa
PF14531Kinase-like16-70 aa
PF03109ABC125-59 aa
PF12330Haspin_kinase54-162 aa
PF06293Kdo62-149 aa
PF03109ABC174-163 aa
PF14531Kinase-like107-218 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA07G067640PF00069Pkinase142693.1e-76257.0
TkA07G067640PF07714PK_Tyr_Ser-Thr152658.9e-40137.3
TkA07G067640PF14531Kinase-like16702e-0731.3
TkA07G067640PF03109ABC125591.2e-0525.4
TkA07G067640PF12330Haspin_kinase541620.03913.7
TkA07G067640PF06293Kdo621490.0215.0
TkA07G067640PF03109ABC1741631.2e-0525.4
TkA07G067640PF14531Kinase-like1072182e-0731.3
TkA07G067640PF01636APH1181490.1912.2
TkA07G067640PF03822NAF3133733.2e-2485.5

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

ProteinOrganismDescriptionIdentityDatabaseConfidence
Q93VD3Arabidopsis thalianasp|Q93VD3|CIPKN_ARATH CBL-interacting serine/threonine-protein kinase 2384.300%Swiss-ProtHigh
Q9MAM1Arabidopsis thalianasp|Q9MAM1|CIPK9_ARATH CBL-interacting serine/threonine-protein kinase 972.900%Swiss-ProtHigh
Q6ZLP5Oryza sativa subsp. japonicasp|Q6ZLP5|CIPKN_ORYSJ CBL-interacting protein kinase 2382.300%Swiss-ProtHigh
Q2QY53Oryza sativa subsp. japonicasp|Q2QY53|CIPKW_ORYSJ CBL-interacting protein kinase 3270.900%Swiss-ProtHigh
Q10SC8Oryza sativa subsp. japonicasp|Q10SC8|CIPK9_ORYSJ CBL-interacting protein kinase 971.900%Swiss-ProtHigh

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