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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp

Gene overview

TkA07G038360
Reference: TK1151 Chr: Chr07 Coordinates: 10184012-10184341 Strand: - Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

330 bp · TkA07G038360|TK1151|cDNA

CAGTTTCAGATTTACAAATCGAGCCGACTTCACTTCGGCAGTGCTACCATCGATCCTTCTTCATCTTCAAATCGGCGACCACAGATCCACCATCGATCCTTCTTCATCTTCAAATCGGCACTTCGGCACTTCGAGCTCCTTCTTCATCTTCAAATCGGCGACGACAGATCCTTCTTCATCTTCAAGTCGGCGACGACAGACCATACATATTCGCACGCAGACAGTTCAAGTCCACCATCGAGCTCCTTCTCCATCTTCAG...

330 bp · TkA07G038360|TK1151|CDS

CAGTTTCAGATTTACAAATCGAGCCGACTTCACTTCGGCAGTGCTACCATCGATCCTTCTTCATCTTCAAATCGGCGACCACAGATCCACCATCGATCCTTCTTCATCTTCAAATCGGCACTTCGGCACTTCGAGCTCCTTCTTCATCTTCAAATCGGCGACGACAGATCCTTCTTCATCTTCAAGTCGGCGACGACAGACCATACATATTCGCACGCAGACAGTTCAAGTCCACCATCGAGCTCCTTCTCCATCTTCAG...

109 aa · TkA07G038360|TK1151|PROTEIN

QFQIYKSSRLHFGSATIDPSSSSNRRPQIHHRSFFIFKSALRHFELLLHLQIGDDRSFFIFKSATTDHTYSHADSSSPPSSSFSIFSSHAEPIKWSPNRSGGLEAVLDS

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA07G038360
TK1151 IDTkA07G038360
OH-1004 IDLXL04_036367
Relationship / confidenceNon Reciprocal Best Hit / Complex relationship
Protein identity (%)92.400
Protein coverage (%)TK1151 84.404 / OH-1004 16.517
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA07G038360
LocationChr07:10184012-10184341 (-)
DescriptionSimilar to ICMTB: Protein-S-isoprenylcysteine O-methyltransferase B
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

No hit for this species in the current source table.

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_036367 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0006481 C-terminal protein methylation Biological Process
GO:0006612 protein targeting to membrane Biological Process
GO:0009788 negative regulation of abscisic acid-activated signaling pathway Biological Process
GO:0009908 flower development Biological Process
GO:0032259 methylation Biological Process
GO:0036211 protein modification process Biological Process
GO:0046498 S-adenosylhomocysteine metabolic process Biological Process
GO:0046499 S-adenosylmethioninamine metabolic process Biological Process
GO:0048367 shoot system development Biological Process
GO:0005783 endoplasmic reticulum Cellular Component
GO:0005789 endoplasmic reticulum membrane Cellular Component
GO:0016020 membrane Cellular Component
KEGG gene cross-reference
ath:AT5G08335
ath:AT5G23320
dosa:Os04g0602900
hsa:23463
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Nucleus0.604
Rank 1 · TkA07G038360 · TK1151
Cytoplasm0.460
Rank 2 · TkA07G038360 · TK1151
Endoplasmic reticulum0.055
Rank 3 · TkA07G038360 · TK1151
Cell membrane0.054
Rank 4 · TkA07G038360 · TK1151
Mitochondrion0.042
Rank 5 · TkA07G038360 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Predicted Functional Domains

No result was found for this query.

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

No result was found for this query.

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