Gene Card
Gene overview
cDNA / CDS / Protein Sequences
2973 bp · TkA07G037030|TK1151|cDNA
GTCGTTTCCGTTATTATTATTCGTAATGTTGTCATTTTATTTTATTTTATTATTTTTAAAAAATTATTAAATTAATAAAATAATATACAAATAAAAAAAATTAGTTAATGAAAAAAATAAAAACAAAAAAAATTACTTTACCTCTGACAAACTTTACCTACCACTCCACCATAAAAAGTTTGCCCGGCAAACTCCCCAAAAAGTGAAAATTGTCCTACGTGTCACAGTTTGCCTCTGCAAACTTTACCTACCATACCGAC...
1623 bp · TkA07G037030|TK1151|CDS
ATGGAAATCGGATCCTGTATGAGACTCCAAAACGGCAGCAGTCCAACATCATACTTAACTCCCGCAAGCTACTACCTCCATGACCAATCAATCCCAACCCAAAACCGTCCTTCTTCTTACGTGACTCTTCCTCGCAAGAATTTCACCTGCAAATCAACTTTAAAGGAAGCCAATAACAACATCGGAGCTCTAGAAAAGGTAGAAGTGAAGCCTTCTTCAGAGATGGAGCTTTCAAGTTTAACAGCCATAAGCCCTTTAGA...
Protein
Download Protein FASTA540 aa · TkA07G037030|TK1151|PROTEIN
MEIGSCMRLQNGSSPTSYLTPASYYLHDQSIPTQNRPSSYVTLPRKNFTCKSTLKEANNNIGALEKVEVKPSSEMELSSLTAISPLDGRYRNSTKDLSPFLSEYGLIYYRTLVEIKWLLKLSQIPQVSEVPIFSNEAESKLQALIDEFSESDAIQVKNIEKTTNHDVKAVEYFLKTKCQEDQEIAKVLEFFHFGCTSEDINNLAHGLMLKESINTVVLPVMDDLIRKIYTMAKLYARIPMLSRTHGQTASPTTLGKEMVI...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkA07G037030 |
|---|---|
| TK1151 ID | TkA07G037030 |
| OH-1004 ID | LXL04_027172 |
| Relationship / confidence | Rbh Below Probable Coverage Or Synteny Threshold / Review |
| Protein identity (%) | 97.200 |
| Protein coverage (%) | TK1151 100.000 / OH-1004 100.000Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkA07G037030 |
|---|---|
| Location | Chr07:9859371-9865992 (+) |
| Description | Similar to purB: Adenylosuccinate lyase (Escherichia coli (strain K12) |
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene ArabidopsisNo hit for this species in the current source table. RiceNo hit for this species in the current source table. |
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · |
| GO annotations (OH1004 source) | GO:0006163 purine nucleotide metabolic process Biological Process GO:0006189 'de novo' IMP biosynthetic process Biological Process GO:0006974 DNA damage response Biological Process GO:0044208 'de novo' AMP biosynthetic process Biological Process GO:0005829 cytosol Cellular Component GO:0004018 N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity Molecular Function GO:0070626 (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido) succinate lyase (fumarate-forming) activity Molecular Function GO:0097216 guanosine tetraphosphate binding Molecular Function |
| KEGG gene cross-reference | ecc:c1510 ecj:JW1117 eco:b1131 ecoc:C3026_06805 hin:HI_0639 pae:PA2629 vco:VC0395_A0644 vcr:VC395_1141 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF22299BRISC_FAM175B_helical119-153 aaPF00206Lyase_1126-386 aaPF08328ASL_C405-519 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| TkA07G037030 | PF22299 | BRISC_FAM175B_helical | 119 | 153 | 0.2 | 12.1 |
| TkA07G037030 | PF00206 | Lyase_1 | 126 | 386 | 3.8e-53 | 181.6 |
| TkA07G037030 | PF08328 | ASL_C | 405 | 519 | 4.4e-50 | 169.3 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
No result was found for this query.