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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkA07G035370
Reference: TK1151 Chr: Chr07 Coordinates: 9410279-9412402 Strand: - Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

1217 bp · TkA07G035370|TK1151|cDNA

AGAATAATCAAGCTGTTGATGATAGTAAGCTTACCAAAATCGGCATTGGTTGGATGATGGCTTCAACTACTGCAAATGGCGGCACTCAAAAAGATGTTACTGTCGATTGGGAAATCGTTGAATTTACAAAGGAAGAGGAAGTGGTCGATGTGGAATTCAATGATAAGTTTGAAGGGAAAACGTTTAAAGATCTTGTTAACGAAAATGATCTATTGCATATAATGCTGGATTCTTCAGAAAGAAATCGTAAGGAAGCAGAG...

CDS

Download CDS FASTA

909 bp · TkA07G035370|TK1151|CDS

ATGATGGCTTCAACTACTGCAAATGGCGGCACTCAAAAAGATGTTACTGTCGATTGGGAAATCGTTGAATTTACAAAGGAAGAGGAAGTGGTCGATGTGGAATTCAATGATAAGTTTGAAGGGAAAACGTTTAAAGATCTTGTTAACGAAAATGATCTATTGCATATAATGCTGGATTCTTCAGAAAGAAATCGTAAGGAAGCAGAGTCTACAATGAAACTTAAAGAAGAAGATTTGAAATCAACAATCTCCAAATTGGA...

Protein

Download Protein FASTA

302 aa · TkA07G035370|TK1151|PROTEIN

MMASTTANGGTQKDVTVDWEIVEFTKEEEVVDVEFNDKFEGKTFKDLVNENDLLHIMLDSSERNRKEAESTMKLKEEDLKSTISKLENNISSLKQSLAIEESQKLDAIDQLKKQKEANTTLKKDQDSLKEELQDVKQYSLTAYEKVKEHEDTYKRWQEYNKSLQQYNTKLQNEIKTTTDANKHVEKEKATLLENHTTLKKLLEDEVKEKATSVKEVQVLRGELQRVNEDRELLVSLIKDLNAEVIRYKESTGRTAAEYAN...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA07G035370
TK1151 IDTkA07G035370
OH-1004 IDLXL04_027147
Relationship / confidenceRbh High Identity Coverage Synteny / Strict
Protein identity (%)100.000
Protein coverage (%)TK1151 100.000 / OH-1004 90.964
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA07G035370
LocationChr07:9410279-9412402 (-)
DescriptionSimilar to KIN14C: Kinesin-like protein KIN-14C
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At4g21270 Kinesin that supports microtubule movement in an ATP- dependent manner and has a minus-end directed polarity.
The Arabidopsis ATK1 gene is required for spindle morphogenesis in male meiosis.2002 · DOI: 10.1242/dev.129.10.2401
Arabidopsis thaliana protein, ATK1, is a minus-end directed kinesin that exhibits non-processive movement.2002 · DOI: 10.1002/cm.10045

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_027147 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0000226 microtubule cytoskeleton organization Biological Process
GO:0007018 microtubule-based movement Biological Process
GO:0009971 anastral spindle assembly involved in male meiosis Biological Process
GO:0051225 spindle assembly Biological Process
GO:0051301 cell division Biological Process
GO:0000776 kinetochore Cellular Component
GO:0005634 nucleus Cellular Component
GO:0005737 cytoplasm Cellular Component
GO:0005739 mitochondrion Cellular Component
GO:0005819 spindle Cellular Component
GO:0005871 kinesin complex Cellular Component
GO:0005872 minus-end kinesin complex Cellular Component
KEGG gene cross-reference
ath:AT4G05190
ath:AT4G21270
ath:AT5G54670
dosa:Os04g0629700
dosa:Os07g0105700
osa:4337093
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cytoplasm0.675
Rank 1 · TkA07G035370 · TK1151
Nucleus0.222
Rank 2 · TkA07G035370 · TK1151
Golgi apparatus0.064
Rank 3 · TkA07G035370 · TK1151
Mitochondrion0.054
Rank 4 · TkA07G035370 · TK1151
Cell membrane0.054
Rank 5 · TkA07G035370 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF10874DUF274623-46 aa
PF11559ADIP43-155 aa
PF28422CCDC8945-134 aa
PF27636CCPG1_N46-135 aa
PF14662KASH_CCD50-91 aa
PF23649FKBP1552-163 aa
PF07888CALCOCO153-135 aa
PF24161CCDC3957-201 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA07G035370PF10874DUF274623462.29.5
TkA07G035370PF11559ADIP431551.69.5
TkA07G035370PF28422CCDC89451341.58.8
TkA07G035370PF27636CCPG1_N461357.47.8
TkA07G035370PF14662KASH_CCD50917.67.2
TkA07G035370PF23649FKBP15521632.78.2
TkA07G035370PF07888CALCOCO1531352.17.9
TkA07G035370PF24161CCDC39572016.3e-0521.8
TkA07G035370PF08614ATG16621932.19.2
TkA07G035370PF28159CEP89642500.310.2
TkA07G035370PF10874DUF274665962.29.5
TkA07G035370PF08702Fib_alpha661150.2112.5
TkA07G035370PF06818Fez1661850.611.3
TkA07G035370PF19220Rod_CreS701880.05213.4
TkA07G035370PF20369DUF666470840.05614.7
TkA07G035370PF25539Bestrophin_270926.27.0

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

ProteinOrganismDescriptionIdentityDatabaseConfidence
Q07970Arabidopsis thalianasp|Q07970|KN14C_ARATH Kinesin-like protein KIN-14C34.500%Swiss-ProtMedium

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