Gene Card
Gene overview
cDNA / CDS / Protein Sequences
333 bp · TkA06G432340|TK1151|cDNA
ATGCTTGACTCCGTGGTTTTCGCGATGGCTAGATTAGGGTACAATGATGTGATGATTGGTGTAGCCGAAACGGGTTGGCCACATGAAGGTGGAATTGGGGCGAATAAAGAGAATGCAGCCGTGTATAACCAGAATCTTGTAAAAAAGATGACCGCGGTCCCACCTAAGGGGACCCCGGCTAGACCAGGGGTTGTGATCCCCACTTATATTTTTTCGTTGTATGATGAGAATGAAAAGTTTGGTCCGGAGTCGGAGAGGCA...
333 bp · TkA06G432340|TK1151|CDS
ATGCTTGACTCCGTGGTTTTCGCGATGGCTAGATTAGGGTACAATGATGTGATGATTGGTGTAGCCGAAACGGGTTGGCCACATGAAGGTGGAATTGGGGCGAATAAAGAGAATGCAGCCGTGTATAACCAGAATCTTGTAAAAAAGATGACCGCGGTCCCACCTAAGGGGACCCCGGCTAGACCAGGGGTTGTGATCCCCACTTATATTTTTTCGTTGTATGATGAGAATGAAAAGTTTGGTCCGGAGTCGGAGAGGCA...
Protein
Download Protein FASTA110 aa · TkA06G432340|TK1151|PROTEIN
MLDSVVFAMARLGYNDVMIGVAETGWPHEGGIGANKENAAVYNQNLVKKMTAVPPKGTPARPGVVIPTYIFSLYDENEKFGPESERHWGLLHPDGSPVYEIDLSGKAYKS
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkA06G432340 |
|---|---|
| TK1151 ID | TkA06G432340 |
| OH-1004 ID | LXL04_033242 |
| Relationship / confidence | Multi Source To Oh1004 / Complex relationship |
| Protein identity (%) | 66.400 |
| Protein coverage (%) | TK1151 100.000 / OH-1004 30.707Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkA06G432340 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Location | Chr06:106994809-106995141 (+) | |||||||||
| Description | Similar to A6: Probable glucan endo-1,3-beta-glucosidase A6 | |||||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
RiceNo hit for this species in the current source table. | |||||||||
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | |||||||||
| GO annotations (OH1004 source) | GO:0005975 carbohydrate metabolic process Biological Process GO:0006076 (1->3)-beta-D-glucan catabolic process Biological Process GO:0006952 defense response Biological Process GO:0009793 embryo development ending in seed dormancy Biological Process GO:0010584 pollen exine formation Biological Process GO:0034407 cell wall (1->3)-beta-D-glucan metabolic process Biological Process GO:0071555 cell wall organization Biological Process GO:0140547 acquisition of seed longevity Biological Process GO:0005576 extracellular region Cellular Component GO:0005634 nucleus Cellular Component GO:0005737 cytoplasm Cellular Component GO:0005886 plasma membrane Cellular Component | |||||||||
| KEGG gene cross-reference | ath:AT1G32860 ath:AT2G27500 ath:AT4G14080 ath:AT5G56590 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF00332Glyco_hydro_171-102 aaPF29664BtgE-BtgC_glyc-hydro18-89 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| TkA06G432340 | PF00332 | Glyco_hydro_17 | 1 | 102 | 2.9e-35 | 123.1 |
| TkA06G432340 | PF29664 | BtgE-BtgC_glyc-hydro | 18 | 89 | 0.00012 | 22.1 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.