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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkA06G373750
Reference: TK1151 Chr: Chr06 Coordinates: 92538827-92543642 Strand: + Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

2528 bp · TkA06G373750|TK1151|cDNA

GTTTATGGAATTTGCGAAGAAATAACAGGAACTTGCGTGCAAAAGGGGAACTCGAGATTCTCGGGGTCTCCTTGATTAATTAATAAACCGAATCGCACGTCTCAATTTTCAAACCCTAAAAATTCAGAGCATCTGGAAAGAGACAAGACGGAAGAATGACGAAAGTGAGATTGGAAAGAGAAAAGTCTCTGGAAAATAGATTGTTGACTCTCTTTCCCTCAACCTCCTTATGTAATCCATGGCGTATTCATCCAACACCT...

CDS

Download CDS FASTA

1587 bp · TkA06G373750|TK1151|CDS

ATGGGAAACTGCTGTATCACCCCCAATAAACCCACCGCCGCCAAAAACAAAAAACCAAACGCGTTTTCAGAATCCTACAGCACCAAACCCCGACCCGAACCCGAACCCAAAATCCACGTCTTAAAAAGCCCAACGGGCCACAACATATCACAAAAATACAATCTCGGACGCGAATTAGGAAGGGGCGAATTCGGAACAACGTATTTATGCACCGATTTGGAAACGGGCGAAAGATTTGCGTGCAAATCGATCTTGAAAAA...

Protein

Download Protein FASTA

528 aa · TkA06G373750|TK1151|PROTEIN

MGNCCITPNKPTAAKNKKPNAFSESYSTKPRPEPEPKIHVLKSPTGHNISQKYNLGRELGRGEFGTTYLCTDLETGERFACKSILKKKLRTSIDVEDVRREVEIMKHLPKHDNIVTLKDSYEDENAVHIVMELCEGGELFDRIVARGHYTERAAAAIMKTIVEVVQICHTHGVMHRDLKPENFLFANKKETAALKTIDFGLSIFFKPGEVFKEIVGSPWYMAPEVLKRNYGPEIDVWSAGVILYILLCGVPPFWAETEQG...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA06G373750
TK1151 IDTkA06G373750
OH-1004 IDLXL04_023241
Relationship / confidenceRbh High Identity Coverage Synteny / Strict
Protein identity (%)99.100
Protein coverage (%)TK1151 100.000 / OH-1004 100.000
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA06G373750
LocationChr06:92538827-92543642 (+)
DescriptionSimilar to CPK7: Calcium-dependent protein kinase 7
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At5g12480 May play a role in signal transduction pathways that involve calcium as a second messenger. No verified direct reference in this release
At5g19450 May play a role in signal transduction pathways that involve calcium as a second messenger. No verified direct reference in this release
At3g57530 May play a role in signal transduction pathways that involve calcium as a second messenger.
Arabidopsis calcium-dependent protein kinase AtCPK32 interacts with ABF4, a transcriptional regulator of abscisic acid-responsive gene expression, and modulates its activity.2005 · DOI: 10.1104/pp.105.069757
At2g41860 May play a role in signal transduction pathways that involve calcium as a second messenger. No verified direct reference in this release

Rice

Reference gene IDPossible functionPapers / DOI
Os07g0568600 May play a role in signal transduction pathways that involve calcium as a second messenger. No verified direct reference in this release
Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_023241 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0009651 response to salt stress Biological Process
GO:0009738 abscisic acid-activated signaling pathway Biological Process
GO:0035556 intracellular signal transduction Biological Process
GO:0005634 nucleus Cellular Component
GO:0005737 cytoplasm Cellular Component
GO:0005829 cytosol Cellular Component
GO:0005886 plasma membrane Cellular Component
GO:0009506 plasmodesma Cellular Component
GO:0009536 plastid Cellular Component
GO:0004683 calcium/calmodulin-dependent protein kinase activity Molecular Function
GO:0004698 calcium,diacylglycerol-dependent serine/threonine kinase activity Molecular Function
GO:0005509 calcium ion binding Molecular Function
KEGG gene cross-reference
ath:AT2G41860
ath:AT3G57530
ath:AT5G12480
ath:AT5G19450
dosa:Os07g0568600
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cell membrane0.533
Rank 1 · TkA06G373750 · TK1151
Cytoplasm0.383
Rank 2 · TkA06G373750 · TK1151
Nucleus0.225
Rank 3 · TkA06G373750 · TK1151
Golgi apparatus0.060
Rank 4 · TkA06G373750 · TK1151
Endoplasmic reticulum0.053
Rank 5 · TkA06G373750 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF14531Kinase-like50-108 aa
PF00069Pkinase53-311 aa
PF07714PK_Tyr_Ser-Thr55-307 aa
PF01636APH67-112 aa
PF06293Kdo82-199 aa
PF01163RIO193-189 aa
PF25578EF-hand_STIM1105-119 aa
PF03109ABC1129-206 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA06G373750PF14531Kinase-like501083.1e-0627.4
TkA06G373750PF00069Pkinase533116.8e-81272.2
TkA06G373750PF07714PK_Tyr_Ser-Thr553076.2e-2795.2
TkA06G373750PF01636APH671120.1412.6
TkA06G373750PF06293Kdo821994.7e-0626.9
TkA06G373750PF01163RIO1931890.09813.0
TkA06G373750PF25578EF-hand_STIM11051190.5111.2
TkA06G373750PF03109ABC11292060.0001222.1
TkA06G373750PF14531Kinase-like1512993.1e-0627.4
TkA06G373750PF01636APH1701890.1412.6
TkA06G373750PF29176Allatotropin-like_C2842950.1112.8
TkA06G373750PF24548EF_EFCAB10_C2903041.7e-0731.5
TkA06G373750PF07714PK_Tyr_Ser-Thr3233716.2e-2795.2
TkA06G373750PF13833EF-hand_83563819.3e-1554.8
TkA06G373750PF25825SAPC2_N3564183.6e-0937.1
TkA06G373750PF30551CFAP251_C3574000.0813.3

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

ProteinOrganismDescriptionIdentityDatabaseConfidence
Q38873Arabidopsis thalianasp|Q38873|CDPK7_ARATH Calcium-dependent protein kinase 776.400%Swiss-ProtHigh
Q42438Arabidopsis thalianasp|Q42438|CDPK8_ARATH Calcium-dependent protein kinase 876.000%Swiss-ProtHigh
Q6NLQ6Arabidopsis thalianasp|Q6NLQ6|CDPKW_ARATH Calcium-dependent protein kinase 3272.200%Swiss-ProtHigh
P93759Arabidopsis thalianasp|P93759|CDPKE_ARATH Calcium-dependent protein kinase 1472.300%Swiss-ProtHigh
Q84SL0Oryza sativa subsp. japonicasp|Q84SL0|CDPKK_ORYSJ Calcium-dependent protein kinase 2071.400%Swiss-ProtHigh

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