Gene Card
Gene overview
cDNA / CDS / Protein Sequences
1257 bp · TkA06G056430|TK1151|cDNA
GGTAGCAATAAATACCTTCATCATCCCACCGAAAACAGACGCAAAATACACGCACTCGCAAAAACCCTTTTGCTTTCTATCTCCCGCATCCGACCCTTTTCACCATTTTCTCTGCCAGATCTTGGAGATGCGTCCTTCTTGAATCGCCGTTCTCTGTTCTTCTCTTCTTCTGGTTTGGTGGGATAACCGAGAAAGAGAGAGAGAGAGATGGCGGAAGTTGTGGGAGCGAAAGAGAGCGCGGTGGTGGATGGTGGTTCGAC...
729 bp · TkA06G056430|TK1151|CDS
ATGGCGGAAGTTGTGGGAGCGAAAGAGAGCGCGGTGGTGGATGGTGGTTCGACGATGTTTAGCGAGGTGGAGGTGAGAGAGATGTCGGGGTTCAAGCGTGGCGGCGATGATCACGTGGAAGTCACGTGTGGGTGCACTAGCTTCTGCTACGGTGACGCCGTCGGCACGCTTAGGGTGTTCGCTAGTGGTGATCTCGAAATCCGATGCGATTGTACCCCTGGCTGTCAAGAAGATAAGCTAACACCGGCTGCTTTTGAGAA...
Protein
Download Protein FASTA242 aa · TkA06G056430|TK1151|PROTEIN
MAEVVGAKESAVVDGGSTMFSEVEVREMSGFKRGGDDHVEVTCGCTSFCYGDAVGTLRVFASGDLEIRCDCTPGCQEDKLTPAAFEKHSGRETARKWKNNIWVIVDGEKVPLSKTALLKYYNKALTKTSSQTTSQRVCHRDEFLKCTQCSKLRRFHLRTKEECRAYHDAFININNWNCSDMPFHKITCDDEEERASRRVYRGCLTSSTCRGCTSCVCFGCGTCRFSDCGCQSCIDFTRNAKA
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkA06G056430 |
|---|---|
| TK1151 ID | TkA06G056430 |
| OH-1004 ID | LXL04_025493 |
| Relationship / confidence | Multi Source To Oh1004 / Complex relationship |
| Protein identity (%) | 93.700 |
| Protein coverage (%) | TK1151 100.000 / OH-1004 100.000Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkA06G056430 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Location | Chr06:15230518-15232782 (-) | |||||||||
| Description | Similar to ULT1: Protein ULTRAPETALA 1 | |||||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
RiceNo hit for this species in the current source table. | |||||||||
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | |||||||||
| GO annotations (OH1004 source) | GO:0006351 DNA-templated transcription Biological Process GO:0009909 regulation of flower development Biological Process GO:0009910 negative regulation of flower development Biological Process GO:0010022 meristem determinacy Biological Process GO:0010080 regulation of floral meristem growth Biological Process GO:0010081 regulation of inflorescence meristem growth Biological Process GO:0010582 floral meristem determinacy Biological Process GO:0040029 epigenetic regulation of gene expression Biological Process GO:1901000 regulation of response to salt stress Biological Process GO:0005634 nucleus Cellular Component GO:0005829 cytosol Cellular Component GO:0003677 DNA binding Molecular Function | |||||||||
| KEGG gene cross-reference | ath:AT2G20825 ath:AT4G28190 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF23292SAND_ULT128-121 aaPF23293zf_ULT143-50 aaPF01342SAND75-102 aaPF13641Glyco_tranf_2_392-159 aaPF23293zf_ULT1139-237 aaPF01342SAND224-236 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| TkA06G056430 | PF23292 | SAND_ULT1 | 28 | 121 | 6.5e-43 | 145.8 |
| TkA06G056430 | PF23293 | zf_ULT1 | 43 | 50 | 5.5e-42 | 143.2 |
| TkA06G056430 | PF01342 | SAND | 75 | 102 | 0.5 | 10.8 |
| TkA06G056430 | PF13641 | Glyco_tranf_2_3 | 92 | 159 | 0.11 | 12.9 |
| TkA06G056430 | PF23293 | zf_ULT1 | 139 | 237 | 5.5e-42 | 143.2 |
| TkA06G056430 | PF01342 | SAND | 224 | 236 | 0.5 | 10.8 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.