Gene Card
Gene overview
cDNA / CDS / Protein Sequences
2531 bp · TkA05G395380|TK1151|cDNA
AACACATTATGATTTTCCAATCAATGCAAGAACTGAAAAACATTTGTTCATCTTAAGAAAATAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAATTGGAGGTCTTCAATGAAGTCCAAAGCGAGTAATCTGACTACATTTTCCTCAATTGTATCTCATTCAAAGTCCCGTGATGCTATCGAATTCTCCATGTTCATTTGTTGGTTCTGCATTAATACCATGAAGTTAGCAAACCAACATTCTTGAAAGAAGAAGATGCAT...
366 bp · TkA05G395380|TK1151|CDS
ATGCCTTCGACTCTCGCAGAATTCTACTGCTTCGACGCTTTCTGGCCACAGAATATACTCTTTGATTCTGGCTTCATAGCATCTGTCCAGCATCTTGTAGCTGAAACATACAACACTATAAAGAAAGCACAACGTGTTGGTCGCGAACTCGTAGACAAACTCAAGAAACTTATCGATAGACAAATGTTTGAGATCACAATACAAGCTGCCATTGGATCGAAGGTCATTGCTAAGGAAACAGGTCAAGGTCATCCATCAGG...
Protein
Download Protein FASTA121 aa · TkA05G395380|TK1151|PROTEIN
MPSTLAEFYCFDAFWPQNILFDSGFIASVQHLVAETYNTIKKAQRVGRELVDKLKKLIDRQMFEITIQAAIGSKVIAKETGQGHPSGNSPPYFGPSRKLDFELEMELLEFHKISSSYLWQV
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkA05G395380 |
|---|---|
| TK1151 ID | TkA05G395380 |
| OH-1004 ID | LXL04_018080 |
| Relationship / confidence | Non Reciprocal Best Hit / Complex relationship |
| Protein identity (%) | 86.700 |
| Protein coverage (%) | TK1151 24.793 / OH-1004 7.075Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkA05G395380 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Location | Chr05:98292869-98298621 (-) | |||||||||
| Description | Similar to FAH: Fumarylacetoacetase | |||||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene ArabidopsisNo hit for this species in the current source table. Rice
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| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | |||||||||
| GO annotations (OH1004 source) | GO:0006527 L-arginine catabolic process Biological Process GO:0006559 L-phenylalanine catabolic process Biological Process GO:0006572 L-tyrosine catabolic process Biological Process GO:0006629 lipid metabolic process Biological Process GO:1902000 homogentisate catabolic process Biological Process GO:0005576 extracellular region Cellular Component GO:0005829 cytosol Cellular Component GO:0070062 extracellular exosome Cellular Component GO:0004334 fumarylacetoacetase activity Molecular Function GO:0046872 metal ion binding Molecular Function | |||||||||
| KEGG gene cross-reference | ath:AT1G12050 bta:508724 dosa:Os02g0196800 hsa:2184 osa:4328618 rno:29383 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF06421LepA_C41-80 aaPF20629GD_AH_C61-91 aaPF24666zf-C2H2_fungi_299-116 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| TkA05G395380 | PF06421 | LepA_C | 41 | 80 | 5.1e-13 | 49.8 |
| TkA05G395380 | PF20629 | GD_AH_C | 61 | 91 | 0.28 | 11.2 |
| TkA05G395380 | PF24666 | zf-C2H2_fungi_2 | 99 | 116 | 0.16 | 12.5 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.