Gene Card
Gene overview
cDNA / CDS / Protein Sequences
3499 bp · TkA05G389340|TK1151|cDNA
TTCTATTCCACACATCCCCATTGCGATCACCACTCTCTCTCTCTCCCTCACTCACTGTGCAGCGCTCCATCGACGTTAACGTTTCTTTAAGGGTAGCGGAAGAACATGACGGACATAACGGACGATATAGCAGAGGAGATTTCGTTTCAGAGCTACGATGATGATCTACGCCTTCTCTTCAGTCTCCTCCACGACGTTCTCCAACGGGAAGTAGGTCCCAGTATCATGGAAAAAATCGAGCATGCTCGTACTCTGTCTCA...
3138 bp · TkA05G389340|TK1151|CDS
ATGACGGACATAACGGACGATATAGCAGAGGAGATTTCGTTTCAGAGCTACGATGATGATCTACGCCTTCTCTTCAGTCTCCTCCACGACGTTCTCCAACGGGAAGTAGGTCCCAGTATCATGGAAAAAATCGAGCATGCTCGTACTCTGTCTCAGAGCGCATGTCTTTTAAGAGGATCTGGGATTGAAGGCACTGCAGAGGTGCTTGAAAAACAATTAGCAAATGAGTTATCAAAGATGACTTTAGAGGAAGCCTTGAA...
Protein
Download Protein FASTA1045 aa · TkA05G389340|TK1151|PROTEIN
MTDITDDIAEEISFQSYDDDLRLLFSLLHDVLQREVGPSIMEKIEHARTLSQSACLLRGSGIEGTAEVLEKQLANELSKMTLEEALKLARALSHFLNLMGIAETHHRTRKAKNVAQASKSCDDTFNQLIQGGFSPDVLYDTVCKQAVEIVLTAHPTQINRRTLQYKHIRISHLLEYNDRKDLTQEDQDTLIEDLVREITSIWQTDELRRHKPTPVDEARAGLNYVESSLWRAVPHYLRRLSNALKKHTGRPLPLTCTPIK...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkA05G389340 |
|---|---|
| TK1151 ID | TkA05G389340 |
| OH-1004 ID | LXL04_021415 |
| Relationship / confidence | Rbh High Identity Coverage Synteny / Strict |
| Protein identity (%) | 99.700 |
| Protein coverage (%) | TK1151 100.000 / OH-1004 100.000Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkA05G389340 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Location | Chr05:96760191-96766147 (+) | |||||||||
| Description | Similar to PPC4: Phosphoenolpyruvate carboxylase 4 | |||||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
RiceNo hit for this species in the current source table. | |||||||||
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | |||||||||
| GO annotations (OH1004 source) | GO:0006099 tricarboxylic acid cycle Biological Process GO:0015977 carbon fixation Biological Process GO:0015979 photosynthesis Biological Process GO:0048366 leaf development Biological Process GO:0005737 cytoplasm Cellular Component GO:0005829 cytosol Cellular Component GO:0009506 plasmodesma Cellular Component GO:0009507 chloroplast Cellular Component GO:0048046 apoplast Cellular Component GO:0008964 phosphoenolpyruvate carboxylase activity Molecular Function | |||||||||
| KEGG gene cross-reference | ath:AT1G68750 ath:AT2G42600 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF00311PEPcase19-340 aaPF00311PEPcase458-1045 aaPF14010PEPcase_2661-754 aaPF28775DUF8458911-929 aaPF28775DUF8458985-1033 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| TkA05G389340 | PF00311 | PEPcase | 19 | 340 | 1051.1 | |
| TkA05G389340 | PF00311 | PEPcase | 458 | 1045 | 1051.1 | |
| TkA05G389340 | PF14010 | PEPcase_2 | 661 | 754 | 0.03 | 13.6 |
| TkA05G389340 | PF28775 | DUF8458 | 911 | 929 | 0.27 | 12.4 |
| TkA05G389340 | PF28775 | DUF8458 | 985 | 1033 | 0.27 | 12.4 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.