How to use this page

Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp

Gene overview

TkA05G384910
Reference: TK1151 Chr: Chr05 Coordinates: 95649113-95649481 Strand: + Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

369 bp · TkA05G384910|TK1151|cDNA

ATGTGGAAATCTCGGAGCTTTTTCAAGTTCATTCCCATGGTTTCTAGGGCTGCGTTTGTGATATCGGAGACGTACACTGCTATATACTCTAAATCCAGACATCCTTGTGCTATTGCTAATCCCCTTTGTGAAACAACACCCTCTTCGTCTTCCATTTCCTGTTCATCTGCTCCTCGCTCGATTCGAAGCCGTTTCAGCAATTTCATCAAATTTGGTTGGATGTTGACGGAATTATCGTTCTCTGTTTCTTTTCAATGCTC...

369 bp · TkA05G384910|TK1151|CDS

ATGTGGAAATCTCGGAGCTTTTTCAAGTTCATTCCCATGGTTTCTAGGGCTGCGTTTGTGATATCGGAGACGTACACTGCTATATACTCTAAATCCAGACATCCTTGTGCTATTGCTAATCCCCTTTGTGAAACAACACCCTCTTCGTCTTCCATTTCCTGTTCATCTGCTCCTCGCTCGATTCGAAGCCGTTTCAGCAATTTCATCAAATTTGGTTGGATGTTGACGGAATTATCGTTCTCTGTTTCTTTTCAATGCTC...

122 aa · TkA05G384910|TK1151|PROTEIN

MWKSRSFFKFIPMVSRAAFVISETYTAIYSKSRHPCAIANPLCETTPSSSSISCSSAPRSIRSRFSNFIKFGWMLTELSFSVSFQCSNSNVQELTRAVMEKKGVPDIIGNYISNLLLLPLTA

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

Download Gene (CDS) Download Protein

ID Mapping

Input IDTkA05G384910
TK1151 IDTkA05G384910
OH-1004 IDLXL04_021372
Relationship / confidenceMulti Source To Oh1004 / Complex relationship
Protein identity (%)95.500
Protein coverage (%)TK1151 90.164 / OH-1004 64.327
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA05G384910
LocationChr05:95649113-95649481 (+)
DescriptionSimilar to At1g10310: NADPH-dependent pterin aldehyde reductase
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

No hit for this species in the current source table.

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_021372 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0006760 folic acid-containing compound metabolic process Biological Process
GO:0030497 fatty acid elongation Biological Process
GO:0005634 nucleus Cellular Component
GO:0005737 cytoplasm Cellular Component
GO:0005829 cytosol Cellular Component
GO:0009507 chloroplast Cellular Component
GO:0004316 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity Molecular Function
GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor Molecular Function
GO:0050661 NADP binding Molecular Function
GO:0051287 NAD binding Molecular Function
KEGG gene cross-reference
ath:AT1G10310
sam:MW1114
sep:SE_0906
ser:SERP0797
tma:TM1724
tmi:THEMA_05620
tmm:Tmari_1732
tmw:THMA_1766
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Mitochondrion0.288
Rank 1 · TkA05G384910 · TK1151
Cytoplasm0.237
Rank 2 · TkA05G384910 · TK1151
Nucleus0.208
Rank 3 · TkA05G384910 · TK1151
Cell membrane0.134
Rank 4 · TkA05G384910 · TK1151
Plastid0.114
Rank 5 · TkA05G384910 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Predicted Functional Domains

No result was found for this query.

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

No result was found for this query.

JBrowse

View in Genome Browser