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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkA05G094110
Reference: TK1151 Chr: Chr05 Coordinates: 25387796-25395241 Strand: - Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

2887 bp · TkA05G094110|TK1151|cDNA

CACAAAAATGAACGTGCTCTAATCTATATTTCAAGTTTTTTTTGTCTCGGTTACAAATTTTCTTCTTTGGATGATCAATGTTCATCTTTATCACTAGAACATGAACACACACAACCAAATTCCTCACCAATTCTCGATAAGCTCCCACATATCGACATGACAACTCCAATCAAGCTTACAATTTTTTTCCTCTCGACATTTACTGTGTTCATACTATGTCCTCCATGTCGCGCTGCGGAAGAAATATCGTCAAAAAACGG...

CDS

Download CDS FASTA

2685 bp · TkA05G094110|TK1151|CDS

CACAAAAATGAACGTGCTCTAATCTATATTTCAAGTTTTTTTTGTCTCGGTTACAAATTTTCTTCTTTGGATGATCAATGTTCATCTTTATCACTAGAACATGAACACACACAACCAAATTCCTCACCAATTCTCGATAAGCTCCCACATATCGACATGACAACTCCAATCAAGCTTACAATTTTTTTCCTCTCGACATTTACTGTGTTCATACTATGTCCTCCATGTCGCGCTGCGGAAGAAATATCGTCAAAAAACGG...

Protein

Download Protein FASTA

894 aa · TkA05G094110|TK1151|PROTEIN

HKNERALIYISSFFCLGYKFSSLDDQCSSLSLEHEHTQPNSSPILDKLPHIDMTTPIKLTIFFLSTFTVFILCPPCRAAEEISSKNGAIRDSNQETLISPGKVFQMGFFELEPNQRYVGIWYYMDPKTIVWVANRDSPISSSSSSMITIKDDGNLVVKDNSKNYFTTSLPSVLGSGNRTLKILDTGNAVLTDASGNHVWSSFAFPTDTFLPGMYMEKTMKLTSWKTLNNPGTGSFVFQKDQVFGYNNYTVFNGKRLHWKS...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA05G094110
TK1151 IDTkA05G094110
OH-1004 IDLXL04_019840
Relationship / confidenceMulti Source To Oh1004 / Complex relationship
Protein identity (%)97.700
Protein coverage (%)TK1151 97.539 / OH-1004 100.000
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA05G094110
LocationChr05:25387796-25395241 (-)
DescriptionSimilar to At4g03230: G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At4g03230 G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230. No verified direct reference in this release
At1g65800 Involved in the regulation of cellular expansion and differentiation. No verified direct reference in this release
At1g11410 G-type lectin S-receptor-like serine/threonine-protein kinase At1g11410. No verified direct reference in this release
At4g21390 G-type lectin S-receptor-like serine/threonine-protein kinase B120. No verified direct reference in this release
UniProt: P0DH86 Female specificity determinant of self-incompatibility. No verified direct reference in this release

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_019840 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0006468 protein phosphorylation Biological Process
GO:0006955 immune response Biological Process
GO:0007165 signal transduction Biological Process
GO:0046777 protein autophosphorylation Biological Process
GO:0048544 recognition of pollen Biological Process
GO:0005576 extracellular region Cellular Component
GO:0005634 nucleus Cellular Component
GO:0005829 cytosol Cellular Component
GO:0005886 plasma membrane Cellular Component
GO:0009507 chloroplast Cellular Component
GO:0004672 protein kinase activity Molecular Function
GO:0004674 protein serine/threonine kinase activity Molecular Function
KEGG gene cross-reference
ath:AT1G11330
ath:AT1G11340
ath:AT1G65800
ath:AT4G03230
ath:AT4G21390
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cell membrane0.856
Rank 1 · TkA05G094110 · TK1151
Endoplasmic reticulum0.084
Rank 2 · TkA05G094110 · TK1151
Cytoplasm0.074
Rank 3 · TkA05G094110 · TK1151
Nucleus0.042
Rank 4 · TkA05G094110 · TK1151
Extracellular0.029
Rank 5 · TkA05G094110 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF17667Pkinase_fungal109-146 aa
PF01453B_lectin128-224 aa
PF00954S_locus_glycop284-356 aa
PF12330Haspin_kinase344-380 aa
PF08276PAN_2374-445 aa
PF14295PAN_4397-441 aa
PF00069Pkinase580-844 aa
PF07714PK_Tyr_Ser-Thr582-847 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA05G094110PF17667Pkinase_fungal1091460.00317.1
TkA05G094110PF01453B_lectin1282241.1e-2281.2
TkA05G094110PF00954S_locus_glycop2843563.5e-1557.2
TkA05G094110PF12330Haspin_kinase3443800.1411.9
TkA05G094110PF08276PAN_23744451.5e-0525.7
TkA05G094110PF14295PAN_43974410.004517.7
TkA05G094110PF00069Pkinase5808442.1e-43149.3
TkA05G094110PF07714PK_Tyr_Ser-Thr5828473.4e-49168.2
TkA05G094110PF03109ABC15866070.09712.5
TkA05G094110PF03109ABC16467330.09712.5
TkA05G094110PF12330Haspin_kinase6937330.1411.9
TkA05G094110PF01636APH6937140.3611.3
TkA05G094110PF17667Pkinase_fungal6967700.00317.1
TkA05G094110PF11883DUF34038498941.8e-0835.0

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

ProteinOrganismDescriptionIdentityDatabaseConfidence
Q9ZR08Arabidopsis thalianasp|Q9ZR08|Y4230_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At4g0323044.500%Swiss-ProtMedium
Q9S972Arabidopsis thalianasp|Q9S972|SD16_ARATH Receptor-like serine/threonine-protein kinase SD1-638.500%Swiss-ProtMedium
Q9LPZ3Arabidopsis thalianasp|Q9LPZ3|Y1141_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g1141037.200%Swiss-ProtMedium
O81906Arabidopsis thalianasp|O81906|B120_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase B12038.500%Swiss-ProtMedium
P0DH86Arabidopsis thalianasp|P0DH86|SRK_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase SRK37.200%Swiss-ProtMedium

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