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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkA05G033120
Reference: TK1151 Chr: Chr05 Coordinates: 8945132-8949671 Strand: - Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

2039 bp · TkA05G033120|TK1151|cDNA

CAATTTGAAGGAAACAGAGAAGACTACAATGAGATTTGTGTTCCTACATATAAAGCAACAATCACCGGCGATTGGAAAGCGGCAAAAAACATTCTCGACAAACGGCCGGAGCTGGTGCGGTTCAGCATCACGGAAAGTGGCGAAACGGTACTTCACATTGCTGTAATGGGGAAATCATACTGGTTTGTGGAATATCTGGTGAGTTTGATGAACAAGGAGGACTTAGAGCTTCAAAATCAAAAAGGTCAGACCGCCCTCTG...

CDS

Download CDS FASTA

2007 bp · TkA05G033120|TK1151|CDS

ATGTTGCAAGAAAACGGAGATATGAAATCTACAAGTAAGAGCCTGGGTTCAATGTATGGGCTGGAACAACACCAAATTAGCATGAATATGGCTTCATTAGATCTCCCTCCACCACGACCACCGTTGAGTCTACCTCGTTCAGATCTTCTTGTCGGAAACAGAGAAGACTACAATGAGATTTGTGTTCCTACATATAAAGCAACAATCACCGGCGATTGGAAAGCGGCAAAAAACATTCTCGACAAACGGCCGGAGCTGGT...

Protein

Download Protein FASTA

668 aa · TkA05G033120|TK1151|PROTEIN

MLQENGDMKSTSKSLGSMYGLEQHQISMNMASLDLPPPRPPLSLPRSDLLVGNREDYNEICVPTYKATITGDWKAAKNILDKRPELVRFSITESGETVLHIAVMGKSYWFVEYLVSLMNKEDLELQNQKGQTALCLAAIAGNVKIAMFLVKKNRALLDIPDNRGMMPLYMAALFGKHDMVTYLYQSSRKMIGDFWTHQLRGGVLVKCVEANLFDVALQIVRDRPELAVNGSVLALLARKPYAFDATTPHIIWRIICSLCR...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA05G033120
TK1151 IDTkA05G033120
OH-1004 IDLXL04_019244
Relationship / confidenceSequence Supported Annotation Or Model Conflict / Review
Protein identity (%)100.000
Protein coverage (%)TK1151 100.000 / OH-1004 100.000
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA05G033120
LocationChr05:8945132-8949671 (-)
DescriptionProtein of unknown function
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

No hit for this species in the current source table.

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_019244 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0002027 regulation of heart rate Biological Process
GO:0006351 DNA-templated transcription Biological Process
GO:0006396 RNA processing Biological Process
GO:0007165 signal transduction Biological Process
GO:0009651 response to salt stress Biological Process
GO:0055117 regulation of cardiac muscle contraction Biological Process
GO:0071222 cellular response to lipopolysaccharide Biological Process
GO:0086069 bundle of His cell to Purkinje myocyte communication Biological Process
GO:1903779 regulation of cardiac conduction Biological Process
GO:0005634 nucleus Cellular Component
GO:0005737 cytoplasm Cellular Component
GO:0005829 cytosol Cellular Component
KEGG gene cross-reference
ath:AT3G12360
dosa:Os01g0837000
hsa:4793
mmu:435766
rbe:RBE_0151
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cell membrane0.887
Rank 1 · TkA05G033120 · TK1151
Cytoplasm0.077
Rank 2 · TkA05G033120 · TK1151
Endoplasmic reticulum0.069
Rank 3 · TkA05G033120 · TK1151
Nucleus0.036
Rank 4 · TkA05G033120 · TK1151
Lysosome / Vacuole0.023
Rank 5 · TkA05G033120 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF12796Ank_265-116 aa
PF13637Ank_483-115 aa
PF13857Ank_593-134 aa
PF00023Ank95-115 aa
PF13606Ank_395-116 aa
PF12796Ank_299-186 aa
PF13857Ank_5121-168 aa
PF00023Ank130-162 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA05G033120PF12796Ank_2651162.3e-2176.9
TkA05G033120PF13637Ank_4831153.1e-1350.3
TkA05G033120PF13857Ank_5931347.8e-0936.4
TkA05G033120PF00023Ank951151.4e-1144.6
TkA05G033120PF13606Ank_3951166.4e-0832.9
TkA05G033120PF12796Ank_2991862.3e-2176.9
TkA05G033120PF13857Ank_51211687.8e-0936.4
TkA05G033120PF00023Ank1301621.4e-1144.6
TkA05G033120PF13606Ank_31301536.4e-0832.9
TkA05G033120PF13637Ank_41341833.1e-1350.3
TkA05G033120PF13857Ank_51561857.8e-0936.4
TkA05G033120PF00023Ank1641841.4e-1144.6
TkA05G033120PF13606Ank_31641856.4e-0832.9
TkA05G033120PF13857Ank_53543987.8e-0936.4
TkA05G033120PF12796Ank_23594122.3e-2176.9
TkA05G033120PF13606Ank_33613806.4e-0832.9

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

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