Gene Card
Gene overview
cDNA / CDS / Protein Sequences
1652 bp · TkA04G127110|TK1151|cDNA
TTTAGAAAATCAAGCTTATAAATGGGACACCAACATCAACTCAGAATCCCAAAATACTACAGCAAATCTCACAATGGGAACTCTCTATCAAACCCCTACCAAATCTTCCACTCCTGAAATTATTCAAGACCTCAAAGTCATCGTTCACGAAACCATCACCATCTTCCCTTCTCATGAGACAGAAAAACGAATCATGTTCTTATCGAACATCGACCAAGTTCTCAATTTCAACGTGGAAACTGTCCACTTCTTTGTGGCGA...
1359 bp · TkA04G127110|TK1151|CDS
ATGGGAACTCTCTATCAAACCCCTACCAAATCTTCCACTCCTGAAATTATTCAAGACCTCAAAGTCATCGTTCACGAAACCATCACCATCTTCCCTTCTCATGAGACAGAAAAACGAATCATGTTCTTATCGAACATCGACCAAGTTCTCAATTTCAACGTGGAAACTGTCCACTTCTTTGTGGCGAACCCTAATTTTCCACAACAAGTAGTGGCGGAAAAGCTTAAATCGGCGTTGAGTGAGGCACTGGTCACGTATGA...
Protein
Download Protein FASTA452 aa · TkA04G127110|TK1151|PROTEIN
MGTLYQTPTKSSTPEIIQDLKVIVHETITIFPSHETEKRIMFLSNIDQVLNFNVETVHFFVANPNFPQQVVAEKLKSALSEALVTYDFLAGRLRMNPDSQRFEFDCNGAGAPFVVGSSEFELGEIGDLLYPNPGFRQLVQRSYDELAVHDRPLCIFQLTSFKCGGFALGVATNHATFDGISFKTFLENIASLAGGKPLATTPCNDRHLLAARSPPNIQFDHPELLKLPTGIDLPTPTVFDCPEGELDFKIFKLTSNDIAH...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkA04G127110 |
|---|---|
| TK1151 ID | TkA04G127110 |
| OH-1004 ID | LXL04_035494 |
| Relationship / confidence | Rbh Below Probable Coverage Or Synteny Threshold / Review |
| Protein identity (%) | 99.700 |
| Protein coverage (%) | TK1151 65.265 / OH-1004 96.091Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkA04G127110 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Location | Chr04:33006294-33016192 (+) | |||||||||
| Description | Similar to HHT1: Omega-hydroxypalmitate O-feruloyl transferase | |||||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
RiceNo hit for this species in the current source table. | |||||||||
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | |||||||||
| GO annotations (OH1004 source) | GO:0006355 regulation of DNA-templated transcription Biological Process GO:0009567 double fertilization forming a zygote and endosperm Biological Process GO:0010345 suberin biosynthetic process Biological Process GO:0052325 cell wall pectin biosynthetic process Biological Process GO:0071555 cell wall organization Biological Process GO:0090431 alkyl caffeate ester biosynthetic process Biological Process GO:0005634 nucleus Cellular Component GO:0005737 cytoplasm Cellular Component GO:0009536 plastid Cellular Component GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups Molecular Function GO:0047172 shikimate O-hydroxycinnamoyltransferase activity Molecular Function GO:0050266 rosmarinate synthase activity Molecular Function | |||||||||
| KEGG gene cross-reference | ath:AT1G65450 ath:AT5G41040 ath:AT5G63560 nta:107796658 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF02458Transferase21-445 aaPF00668Condensation137-192 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| TkA04G127110 | PF02458 | Transferase | 21 | 445 | 6.8e-110 | 368.4 |
| TkA04G127110 | PF00668 | Condensation | 137 | 192 | 0.28 | 10.6 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.