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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp

Gene overview

TkA03G525920
Reference: TK1151 Chr: Chr03 Coordinates: 132023577-132025032 Strand: - Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

667 bp · TkA03G525920|TK1151|cDNA

TGAAAACAGATATGCTGGATGCTCTTTTAGAGACGATTGACGAAAAAGGAATAAAACTTGATGATGAGGAAATAATCGACATTTTAATCATGTACCTGAACGCTGGTCATGAATCTTCGGCTCCATGACAATGTGGTCAACCATCCTTCTCCAAGCACATCCTCAATTTCTCCAAAAAGCAAAGGAAGAACAAGAGATGATCTTGAAGAATAGGCCACCGACTCAAGAGGGTTTGACTTTGAAAGAGTATAGGCAGATGG...

543 bp · TkA03G525920|TK1151|CDS

ATGACAATGTGGTCAACCATCCTTCTCCAAGCACATCCTCAATTTCTCCAAAAAGCAAAGGAAGAACAAGAGATGATCTTGAAGAATAGGCCACCGACTCAAGAGGGTTTGACTTTGAAAGAGTATAGGCAGATGGAGTATCTCTCCAAGGTTATCGATGAAGCACTTCGTCTAGTAACGTTTTCGGTTATGTCGTTTCGAGAAGCCAAAAAAGACGTGAATATAAAAGGTTACATCATTCCTAAAGGATGGAAAGTGAT...

181 aa · TkA03G525920|TK1151|PROTEIN

MTMWSTILLQAHPQFLQKAKEEQEMILKNRPPTQEGLTLKEYRQMEYLSKVIDEALRLVTFSVMSFREAKKDVNIKGYIIPKGWKVMIWFRSLHLNPDIYPHPKEFNPSRWDNLVPKPGTFLPFGAGSRLCPGNAKLEIAIFLHHFRLNYEFERENTQCPVMYLPLARTRDNCLGIIRRIP

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA03G525920
TK1151 IDTkA03G525920
OH-1004 IDLXL04_010512
Relationship / confidenceNon Reciprocal Best Hit / Complex relationship
Protein identity (%)77.900
Protein coverage (%)TK1151 98.895 / OH-1004 30.217
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA03G525920
LocationChr03:132023577-132025032 (-)
DescriptionSimilar to KAO1: Ent-kaurenoic acid oxidase 1
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At2g32440 Catalyzes three successive oxidations of ent-kaurenoic acid giving gibberellin 12 (GA12), a key step in gibberellins (GAs) biosynthesis. No verified direct reference in this release
At1g05160 Catalyzes three successive oxidations of ent-kaurenoic acid giving gibberellin 12 (GA12), a key step in gibberellins (GAs) biosynthesis. No verified direct reference in this release

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_010512 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0009685 gibberellin metabolic process Biological Process
GO:0009686 gibberellin biosynthetic process Biological Process
GO:0009846 pollen germination Biological Process
GO:0009860 pollen tube growth Biological Process
GO:0048868 pollen tube development Biological Process
GO:0005739 mitochondrion Cellular Component
GO:0005783 endoplasmic reticulum Cellular Component
GO:0005789 endoplasmic reticulum membrane Cellular Component
GO:0005506 iron ion binding Molecular Function
GO:0020037 heme binding Molecular Function
GO:0051777 ent-kaurenoic acid monooxygenase activity Molecular Function
KEGG gene cross-reference
ath:AT1G05160
ath:AT2G32440
dosa:Os06g0110000
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Mitochondrion0.219
Rank 1 · TkA03G525920 · TK1151
Endoplasmic reticulum0.194
Rank 2 · TkA03G525920 · TK1151
Peroxisome0.154
Rank 3 · TkA03G525920 · TK1151
Cytoplasm0.117
Rank 4 · TkA03G525920 · TK1151
Nucleus0.033
Rank 5 · TkA03G525920 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF00067p4504-160 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA03G525920PF00067p45041602.4e-37129.5

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

ProteinOrganismDescriptionIdentityDatabaseConfidence
Q9C5Y2Arabidopsis thalianasp|Q9C5Y2|KAO2_ARATH Ent-kaurenoic acid oxidase 266.300%Swiss-ProtHigh
O23051Arabidopsis thalianasp|O23051|KAO1_ARATH Ent-kaurenoic acid oxidase 163.500%Swiss-ProtHigh

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