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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkA03G324370
Reference: TK1151 Chr: Chr03 Coordinates: 79712138-79716899 Strand: + Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

3252 bp · TkA03G324370|TK1151|cDNA

TAGAAGTCCACCATACACGGACTAAAATTGTTCAAAATCCCTTTGTATTCGTAGATGCTATCAACAGATTTTGTACGAAATCCTCTGATTCATTCATTCAATTCTACGTCCATCAATTTGCAGCACATTCTCTCTATACGACGATGTCGTCAATTGCGTTGATTTTAATTGGACTTGCAATTTTTACCGGTGTGAAGATAGCTATGTTCGCCGTGTTTTATGTTCGCTGAATCAATTGTAACGAGGTTTCTTTAATCTGC...

CDS

Download CDS FASTA

1557 bp · TkA03G324370|TK1151|CDS

ATGGAGTCAATTTCTGGAGATGAGTTTGACCCAAGTGATGAACTAGACTCAAATGCACAAGAAGAGAAGATCTTCGTTGCAGTGAGGCTTAGGCCTTTAAACGATAAAGAAATTGCAAAAAACGATTTATCCGATTGGGAATGCATAAACAAAACCACCATTATATACAAAAGCAACAACCAATCAGACAGACCAATGTACCCAAACGCCTTCACTTTCGACCGAGTATACGGATATGACAGTACAACAAAACAAATATA...

Protein

Download Protein FASTA

518 aa · TkA03G324370|TK1151|PROTEIN

MESISGDEFDPSDELDSNAQEEKIFVAVRLRPLNDKEIAKNDLSDWECINKTTIIYKSNNQSDRPMYPNAFTFDRVYGYDSTTKQIYDEGVKTIALSVLNGINSSVFAYGQTSSGKTYTMSGITEFAIADIYDYINRHNDREFVMKFSAIEIYNECVKDLLSVDNTQLRLLDDPEKGTVVEKLTEANLRDCNHLKELIYMSEAERQIGETALNEMSSRSHQILRLTVESSALDYKGGDSGRSLSATVSFVDLAGSERASQ...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA03G324370
TK1151 IDTkA03G324370
OH-1004 IDLXL04_008835
Relationship / confidenceRbh Below Probable Coverage Or Synteny Threshold / Review
Protein identity (%)98.800
Protein coverage (%)TK1151 96.718 / OH-1004 60.000
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA03G324370
LocationChr03:79712138-79716899 (+)
DescriptionSimilar to KIN7F: Kinesin-like protein KIN-7F
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At3g51150 Kinesin-like protein KIN-7G. No verified direct reference in this release
At5g66310 Kinesin-like protein KIN-7H. No verified direct reference in this release
At2g21300 Kinesin-like protein KIN-7E. No verified direct reference in this release

Rice

Reference gene IDPossible functionPapers / DOI
Os04g0538800 Binds ATP/ADP in vitro. No verified direct reference in this release
Os02g0645100 Kinesin-like protein KIN-7C. No verified direct reference in this release
Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_008835 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0007018 microtubule-based movement Biological Process
GO:0005737 cytoplasm Cellular Component
GO:0005874 microtubule Cellular Component
GO:0003777 microtubule motor activity Molecular Function
GO:0005524 ATP binding Molecular Function
GO:0008017 microtubule binding Molecular Function
GO:0016887 ATP hydrolysis activity Molecular Function
KEGG gene cross-reference
ath:AT2G21300
ath:AT3G51150
dosa:Os04g0538800
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cytoplasm0.728
Rank 1 · TkA03G324370 · TK1151
Nucleus0.293
Rank 2 · TkA03G324370 · TK1151
Cell membrane0.076
Rank 3 · TkA03G324370 · TK1151
Mitochondrion0.044
Rank 4 · TkA03G324370 · TK1151
Lysosome / Vacuole0.041
Rank 5 · TkA03G324370 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF16796Microtub_bd26-161 aa
PF00225Kinesin29-346 aa
PF23568ARM_LIN95-132 aa
PF26069DUF8026127-165 aa
PF02181FH2339-424 aa
PF23568ARM_LIN352-422 aa
PF26069DUF8026356-373 aa
PF26466DNA_primase_lrg_N356-414 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA03G324370PF16796Microtub_bd261613.6e-2073.2
TkA03G324370PF00225Kinesin293466.4e-97325.2
TkA03G324370PF23568ARM_LIN951320.2611.2
TkA03G324370PF26069DUF80261271650.06913.9
TkA03G324370PF02181FH23394240.0115.7
TkA03G324370PF23568ARM_LIN3524220.2611.2
TkA03G324370PF26069DUF80263563730.06913.9
TkA03G324370PF26466DNA_primase_lrg_N3564140.1113.0
TkA03G324370PF03836IQGAP_helical3594200.02815.1
TkA03G324370PF10805DUF27303604160.2312.5
TkA03G324370PF21408MTR4-like_stalk3603787.87.6
TkA03G324370PF22564HAAS3694060.1213.4
TkA03G324370PF00225Kinesin3734086.4e-97325.2
TkA03G324370PF15794CCDC1063974740.0215.4
TkA03G324370PF21408MTR4-like_stalk3974117.87.6
TkA03G324370PF26069DUF80264465000.06913.9

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

ProteinOrganismDescriptionIdentityDatabaseConfidence
F4J394Arabidopsis thalianasp|F4J394|KN7G_ARATH Kinesin-like protein KIN-7G62.300%Swiss-ProtHigh
F4JZ68Arabidopsis thalianasp|F4JZ68|KN7H_ARATH Kinesin-like protein KIN-7H63.600%Swiss-ProtHigh
F4IGL2Arabidopsis thalianasp|F4IGL2|KN7E_ARATH Kinesin-like protein KIN-7E62.000%Swiss-ProtHigh
Q7X7H4Oryza sativa subsp. japonicasp|Q7X7H4|KN7F_ORYSJ Kinesin-like protein KIN-7F64.900%Swiss-ProtHigh
Q6H638Oryza sativa subsp. japonicasp|Q6H638|KN7C_ORYSJ Kinesin-like protein KIN-7C61.800%Swiss-ProtHigh

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