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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkA03G145450
Reference: TK1151 Chr: Chr03 Coordinates: 37076873-37079168 Strand: - Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

1228 bp · TkA03G145450|TK1151|cDNA

AGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGCCCCACGGTGGGCGTTTCTTTTTTTGCCATCGCCCGTCCCTCCAACGCAAATTTCGTAGTTCCCAGCGCCAAAAACGTGTACGGAATTGACAATCCATCTTCTCTTTTTGGTTGATTTCCTCTTCTAGTTGATCCAGGATCTTCAACAAATTTTTAACAGGAGGAAGTTAATTTTTTTTTTCTCAAATTCGATACTAATGGCCGCTTATGCGGCTTGTCGTCG...

CDS

Download CDS FASTA

729 bp · TkA03G145450|TK1151|CDS

ATGGCCGCTTATGCGGCTTGTCGTCGTGCCGGAACCAAATTGAGATCCGTTCAGGCTACCAAATCATCGCTGTTACAAGGCGGTTTCGTCTCAACGAATACACTTTCATCTTCATCTCATATTTATCCAAGTTATAACAGATTTGATTGCAGACAAGTTTCTCAACAACCTCAATCCAATGGGAAGCGCCTGTTTCTCGTCGATACCCTAGCCCTAGTAAGGAGGTTAGAGGCTGAAGGTGTGCCTTCGAAGCAAGCTGA...

Protein

Download Protein FASTA

242 aa · TkA03G145450|TK1151|PROTEIN

MAAYAACRRAGTKLRSVQATKSSLLQGGFVSTNTLSSSSHIYPSYNRFDCRQVSQQPQSNGKRLFLVDTLALVRRLEAEGVPSKQAEVITSAIIEVLNDSLENVAQSFVSKGEMERIEMTQDGNLGKFKSRVQSSQENHFSLLQRETEKLQSDIEKMRSELKYEIDKVTAGQRLDLNLERGRIRDELSNQNHETSNLTNKLDNEIHSLKAQLEAAKYDVIKYCIGTLVSISAVGLAVLRILM

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA03G145450
TK1151 IDTkA03G145450
OH-1004 IDLXL04_013801
Relationship / confidenceMulti Source To Oh1004 / Complex relationship
Protein identity (%)83.800
Protein coverage (%)TK1151 100.000 / OH-1004 100.000
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA03G145450
LocationChr03:37076873-37079168 (-)
DescriptionSimilar to FMP32: Protein FMP32, mitochondrial (Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

No hit for this species in the current source table.

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_013801 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0033617 mitochondrial respiratory chain complex IV assembly Biological Process
GO:2000214 regulation of L-proline metabolic process Biological Process
GO:0005739 mitochondrion Cellular Component
GO:0005743 mitochondrial inner membrane Cellular Component
GO:0031966 mitochondrial membrane Cellular Component
KEGG gene cross-reference
hsa:60492
mmu:66365
rno:308820
sce:YFL046W
xtr:448234
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Mitochondrion0.932
Rank 1 · TkA03G145450 · TK1151
Nucleus0.061
Rank 2 · TkA03G145450 · TK1151
Cytoplasm0.050
Rank 3 · TkA03G145450 · TK1151
Cell membrane0.016
Rank 4 · TkA03G145450 · TK1151
Plastid0.010
Rank 5 · TkA03G145450 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF25887HB_LcnD32-161 aa
PF07798CCDC90-like67-240 aa
PF17253DUF532079-106 aa
PF02601Exonuc_VII_L82-213 aa
PF08702Fib_alpha84-162 aa
PF06705SF-assemblin91-107 aa
PF30757CCDC12594-166 aa
PF04728LPP98-108 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA03G145450PF25887HB_LcnD321610.00916.6
TkA03G145450PF07798CCDC90-like672407.7e-60202.4
TkA03G145450PF17253DUF5320791066.98.6
TkA03G145450PF02601Exonuc_VII_L822130.0215.1
TkA03G145450PF08702Fib_alpha841620.7910.6
TkA03G145450PF06705SF-assemblin911070.3211.0
TkA03G145450PF30757CCDC125941660.9410.3
TkA03G145450PF04728LPP981080.7710.8
TkA03G145450PF20878REST_helical991580.002218.9
TkA03G145450PF03179V-ATPase_G1121651.310.3
TkA03G145450PF30022Spc25_N_drosophila1132050.1912.9
TkA03G145450PF03961FapA1131675.27.3
TkA03G145450PF28954SHE10_OSW_C1162140.01914.9
TkA03G145450PF04871Uso1_p115_C1181680.4711.5
TkA03G145450PF27241CLIP11242140.0315.1
TkA03G145450PF28907ZapB_rel1241631.410.3

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

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