Gene Card
Gene overview
cDNA / CDS / Protein Sequences
928 bp · LXL04_013801|LXL04_013801|OH1004|cDNA
ACGATAAAAACTCACAAACCTAATCTAATTTTCCTTCCGTATCAAATCGGGAATcgatttcattttttttttcaatcaCGATTCTTCGATTTCATTTTTCTTTCATTCCTTCGTTTCTGATCGAGGGTCTTCAGTAGATTGTTGTTGGGAGGAAGTTCATAGTTCCGTTTCCGATTCTTCATTAATGGCCGCTTATGCGGCCTGTATTCGGGCCGGAACGAGATTAAGATCCGCCCAGGCCATTAACTCATCGGTTCTCA...
744 bp · LXL04_013801|LXL04_013801|OH1004|CDS
ATGGCCGCTTATGCGGCCTGTATTCGGGCCGGAACGAGATTAAGATCCGCCCAGGCCATTAACTCATCGGTTCTCAGAGGCGTCTTCGTTCCCACAAGCCACATCACACCTTCATCTTCGTTATCTTCGTCTCATTGTGATCCGAGTTATATCAGATTCAGTTGCAGGCAAAATTCTCAACTTGTTCAATCTAACAGCAAACGCGTGTTCCTTGTTGATACCCTAGCGCTTGTTAGAAGATTAGAAGGACAAGGCGTACC...
Protein
Download Protein FASTA247 aa · LXL04_013801|LXL04_013801|OH1004|PROTEIN
MAAYAACIRAGTRLRSAQAINSSVLRGVFVPTSHITPSSSLSSSHCDPSYIRFSCRQNSQLVQSNSKRVFLVDTLALVRRLEGQGVPSKQAEAITSAITEVLNDSLENVAQSFVSKGEMQRIEMTQDGNLGKFKSQVQSSQENHFSLLQRETEKLRNDIEKMRSELRYEIDKVTAGQRLDLNLERGRIRDELANQNQETANLTNKLDREIHSLKAQLEAAKYDVIKYCIGTLVSISAVGLAVLRILM
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | LXL04_013801 |
|---|---|
| Source version | OH-1004 / GCA_047496595.1_OSU_TarKok_2.0 |
SNP / Indel variants and carrier samplesCRA009020 · OH-1004
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | LXL04_013801 |
|---|---|
| Location | Chr03:36140959-36142431 (-) |
| Description | Similar to FMP32: Protein FMP32, mitochondrial (Saccharomyces cerevisiae (strain ATCC 204508 / S288c) |
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene ArabidopsisNo hit for this species in the current source table. RiceNo hit for this species in the current source table. |
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · |
| GO annotations (OH1004 source) | GO:0033617 mitochondrial respiratory chain complex IV assembly Biological Process GO:2000214 regulation of L-proline metabolic process Biological Process GO:0005739 mitochondrion Cellular Component GO:0005743 mitochondrial inner membrane Cellular Component GO:0031966 mitochondrial membrane Cellular Component |
| KEGG gene cross-reference | hsa:60492 mmu:66365 rno:308820 sce:YFL046W xtr:448234 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF07798.17CCDC90-like72-245 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| LXL04_013801 | PF07798.17 | CCDC90-like | 72 | 245 | 1.2e-60 | 205.1 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
No result was found for this query.