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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkA03G031910
Reference: TK1151 Chr: Chr03 Coordinates: 8532102-8533877 Strand: + Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

1170 bp · TkA03G031910|TK1151|cDNA

ATCCAAGGGACGAGGATCGTATTAAAGATGGGACAAATTCGAGTTTATATGTGATATATGATTTGTTCGTGTCGTTTATCCACTCTCGAAAGAACTAAGGATTCACAGAAGCTTAAAGAACAAGATAAGATATGGGGTTGGAAGTTAATGCCGTGTACCTCTCTTATGTGGTGCACGTTCTGGCCGTCGCCGGATCGGTGATGGTTCTGGTTTGGAACATCCACTTCAGAGGCGGATTAGCTTGGGAATCTACTAACAAG...

CDS

Download CDS FASTA

693 bp · TkA03G031910|TK1151|CDS

ATGGGGTTGGAAGTTAATGCCGTGTACCTCTCTTATGTGGTGCACGTTCTGGCCGTCGCCGGATCGGTGATGGTTCTGGTTTGGAACATCCACTTCAGAGGCGGATTAGCTTGGGAATCTACTAACAAGAATCTCATCTTCAACGTTCATCCTGTTCTGATGCTAATTGGTTTGATTATCATGGGCGGTGAAGCCATCGTAAGCTACAAAGCTCTTCCGTTCAAAAAGGCTGAAAAGAAGCTCATACATCTTATCCTTCA...

Protein

Download Protein FASTA

230 aa · TkA03G031910|TK1151|PROTEIN

MGLEVNAVYLSYVVHVLAVAGSVMVLVWNIHFRGGLAWESTNKNLIFNVHPVLMLIGLIIMGGEAIVSYKALPFKKAEKKLIHLILHAIALVLGIIGIYMAFKNHNESGIANLYSLHSWLGIGIIVLYGVQWVYGFLVFFYPGGTGDLRKESLPWHVLFGMFVYILAVANSALGFLEKLTFLESSGIAKYGSEAFLVNFTAIVAVLYGTFVLLTALSRAPAEDNHSYSAI

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

Download Gene (CDS) Download Protein

ID Mapping

Input IDTkA03G031910
TK1151 IDTkA03G031910
OH-1004 IDLXL04_011890
Relationship / confidenceMulti Source To Oh1004 / Complex relationship
Protein identity (%)100.000
Protein coverage (%)TK1151 100.000 / OH-1004 100.000
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA03G031910
LocationChr03:8532102-8533877 (+)
DescriptionSimilar to CYB561A: Transmembrane ascorbate ferrireductase 1
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At4g25570 Two-heme-containing cytochrome.
Localization of an ascorbate-reducible cytochrome b561 in the plant tonoplast.2004 · DOI: 10.1104/pp.103.032359

Rice

Reference gene IDPossible functionPapers / DOI
Os02g0642300 Two-heme-containing cytochrome. No verified direct reference in this release
Os04g0533500 Two-heme-containing cytochrome. No verified direct reference in this release
Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_011890 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0000325 plant-type vacuole Cellular Component
GO:0005576 extracellular region Cellular Component
GO:0005773 vacuole Cellular Component
GO:0009507 chloroplast Cellular Component
GO:0009705 plant-type vacuole membrane Cellular Component
GO:0016020 membrane Cellular Component
GO:0009055 electron transfer activity Molecular Function
GO:0016491 oxidoreductase activity Molecular Function
GO:0019904 protein domain specific binding Molecular Function
GO:0046872 metal ion binding Molecular Function
GO:0140571 transmembrane ascorbate ferrireductase activity Molecular Function
KEGG gene cross-reference
ath:AT4G25570
dosa:Os02g0642300
dosa:Os04g0533500
zma:100273009
zma:100384594
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Golgi apparatus0.297
Rank 1 · TkA03G031910 · TK1151
Cytoplasm0.287
Rank 2 · TkA03G031910 · TK1151
Lysosome / Vacuole0.282
Rank 3 · TkA03G031910 · TK1151
Cell membrane0.219
Rank 4 · TkA03G031910 · TK1151
Endoplasmic reticulum0.152
Rank 5 · TkA03G031910 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF07836DmpG_comm8-33 aa
PF03188Cytochrom_B56113-26 aa
PF03203MerC15-62 aa
PF19885DUF635818-26 aa
PF19885DUF635843-68 aa
PF03188Cytochrom_B56149-181 aa
PF29123R07B1_N52-130 aa
PF12576DUF375454-104 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA03G031910PF07836DmpG_comm8330.08513.1
TkA03G031910PF03188Cytochrom_B56113261.4e-46158.8
TkA03G031910PF03203MerC15620.02116.1
TkA03G031910PF19885DUF635818260.07114.0
TkA03G031910PF19885DUF635843680.07114.0
TkA03G031910PF03188Cytochrom_B561491811.4e-46158.8
TkA03G031910PF29123R07B1_N521300.04714.5
TkA03G031910PF12576DUF3754541044.38.0
TkA03G031910PF01292Ni_hydr_CYTB691386.77.2
TkA03G031910PF03203MerC771250.02116.1
TkA03G031910PF19885DUF6358791070.07114.0
TkA03G031910PF01292Ni_hydr_CYTB812116.77.2
TkA03G031910PF07836DmpG_comm901080.08513.1
TkA03G031910PF03203MerC1531770.02116.1
TkA03G031910PF12576DUF37541762144.38.0
TkA03G031910PF19885DUF63581912050.07114.0

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

ProteinOrganismDescriptionIdentityDatabaseConfidence
Q8L856Arabidopsis thalianasp|Q8L856|ACFR1_ARATH Transmembrane ascorbate ferrireductase 169.800%Swiss-ProtHigh
A3A9H6Oryza sativa subsp. japonicasp|A3A9H6|ACET1_ORYSJ Probable ascorbate-specific transmembrane electron transporter 167.500%Swiss-ProtHigh
Q7XMK3Oryza sativa subsp. japonicasp|Q7XMK3|ACET2_ORYSJ Probable ascorbate-specific transmembrane electron transporter 264.300%Swiss-ProtHigh

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