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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkA02G579150
Reference: TK1151 Chr: Chr02 Coordinates: 149395294-149397089 Strand: + Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

887 bp · TkA02G579150|TK1151|cDNA

ATGTGTTTTGCCTCTTCATCTTCTTTCAATACCACTAAAAAATGCTCTCCTCAACAAACCCTTGCGTTGCTTTTATTTAAACAAAATCTCACTTCCATACATTCCCCAGATGATGATCCACAACATAATTCTGCATGTCAGAATCTTCTTCGTTCTGATTATCATCCAATTATGATGCACTGGAGCATGGGTACCGATTGTTGCAATTGGGATGGTATTACATGCAACCACTTAACGGGTGATGTTATCGGTATCGACTT...

CDS

Download CDS FASTA

885 bp · TkA02G579150|TK1151|CDS

ATGTGTTTTGCCTCTTCATCTTCTTTCAATACCACTAAAAAATGCTCTCCTCAACAAACCCTTGCGTTGCTTTTATTTAAACAAAATCTCACTTCCATACATTCCCCAGATGATGATCCACAACATAATTCTGCATGTCAGAATCTTCTTCGTTCTGATTATCATCCAATTATGATGCACTGGAGCATGGGTACCGATTGTTGCAATTGGGATGGTATTACATGCAACCACTTAACGGGTGATGTTATCGGTATCGACTT...

Protein

Download Protein FASTA

295 aa · TkA02G579150|TK1151|PROTEIN

MCFASSSSFNTTKKCSPQQTLALLLFKQNLTSIHSPDDDPQHNSACQNLLRSDYHPIMMHWSMGTDCCNWDGITCNHLTGDVIGIDLSCGMLQGVWNFENLLSTLPNLQVLDLSFSGLSVVSDNSTTYVDPDFWFINLASCNLNIFPPSLRAMKNLQYLLLYGNNIRGPIPNWAREIGGDGLIALDLSNNSITRLPESFQWDGLTQLAIGSNKIKGPFPPSICNMKNLQYLDLSNNSFYGMIPQCIRNIISLGMINLGTN...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

Download Gene (CDS) Download Protein

ID Mapping

Input IDTkA02G579150
TK1151 IDTkA02G579150
OH-1004 IDLXL04_012240
Relationship / confidenceNon Reciprocal Best Hit / Complex relationship
Protein identity (%)44.400
Protein coverage (%)TK1151 73.898 / OH-1004 34.001
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA02G579150
LocationChr02:149395294-149397089 (+)
DescriptionSimilar to 9DC3: Receptor-like protein 9DC3
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At3g11080 Receptor-like protein 35. No verified direct reference in this release
At5g27060 Receptor-like protein 53. No verified direct reference in this release
At3g05660 Receptor-like protein 33. No verified direct reference in this release
At3g28890 Receptor-like protein 43. No verified direct reference in this release
At1g45616 Receptor-like protein 6. No verified direct reference in this release

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_012240 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0002238 response to molecule of fungal origin Biological Process
GO:0050832 defense response to fungus Biological Process
GO:0005886 plasma membrane Cellular Component
KEGG gene cross-reference
ag:AAA65235
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cell membrane0.710
Rank 1 · TkA02G579150 · TK1151
Endoplasmic reticulum0.124
Rank 2 · TkA02G579150 · TK1151
Cytoplasm0.073
Rank 3 · TkA02G579150 · TK1151
Nucleus0.071
Rank 4 · TkA02G579150 · TK1151
Extracellular0.068
Rank 5 · TkA02G579150 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF08263LRRNT_218-76 aa
PF00560LRR_174-81 aa
PF25013LRR_Zer-199-124 aa
PF12799LRR_4100-115 aa
PF23598LRR_14101-160 aa
PF13855LRR_8103-125 aa
PF00560LRR_1107-120 aa
PF00560LRR_1136-151 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA02G579150PF08263LRRNT_218761e-0526.4
TkA02G579150PF00560LRR_174815.6e-1861.9
TkA02G579150PF25013LRR_Zer-1991240.0003521.4
TkA02G579150PF12799LRR_41001152.7e-1350.4
TkA02G579150PF23598LRR_141011601.4e-0524.7
TkA02G579150PF13855LRR_81031257.8e-1658.3
TkA02G579150PF00560LRR_11071205.6e-1861.9
TkA02G579150PF00560LRR_11361515.6e-1861.9
TkA02G579150PF12799LRR_41361722.7e-1350.4
TkA02G579150PF13855LRR_81371667.8e-1658.3
TkA02G579150PF00560LRR_11551735.6e-1861.9
TkA02G579150PF13855LRR_81802007.8e-1658.3
TkA02G579150PF00560LRR_11822005.6e-1861.9
TkA02G579150PF12799LRR_41822152.7e-1350.4
TkA02G579150PF25013LRR_Zer-11822360.0003521.4
TkA02G579150PF23598LRR_141852591.4e-0524.7

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

ProteinOrganismDescriptionIdentityDatabaseConfidence
Q9SRL7Arabidopsis thalianasp|Q9SRL7|RLP35_ARATH Receptor-like protein 3541.900%Swiss-ProtLow
Q9S9U3Arabidopsis thalianasp|Q9S9U3|RLP53_ARATH Receptor-like protein 5338.200%Swiss-ProtLow
F4J8G2Arabidopsis thalianasp|F4J8G2|RLP33_ARATH Receptor-like protein 3351.600%Swiss-ProtLow
Q9LJW7Arabidopsis thalianasp|Q9LJW7|RLP43_ARATH Receptor-like protein 4337.100%Swiss-ProtLow
Q9C637Arabidopsis thalianasp|Q9C637|RLP6_ARATH Receptor-like protein 628.300%Swiss-ProtLow

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