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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkA02G373150
Reference: TK1151 Chr: Chr02 Coordinates: 94965349-94974072 Strand: - Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

3943 bp · TkA02G373150|TK1151|cDNA

GTTACTTTTAGCGTGTGTGTGTGTAAAGATTAGTAGATTAAATTAAAATGTACACATACTATATATAGGTTTGATTCGACCGGAGGAAACTATCCTGGGGGTTTGAAATTTTGACACATCAAAACCGAATCATGATGTAAAATCAAGGAAGGCTTTGATTCGATATTTCGATTGTTGGAGAATTTGATCCTGCGAAATAATCCAACAGGTGAAATGGACATGCTAATGGTGAATTAAGAATGGGAAGTACCAGGGAACAC...

CDS

Download CDS FASTA

2388 bp · TkA02G373150|TK1151|CDS

ATGGGGGCAATTGTCACCGGAGATCGGTATCTCGAATCGCTAGTGAAGTTCGTCGAGAAGCAGGCTGGTCCGTTGATCGAAGGAACGATTGTATTGAAGTTGAATCCGGTTGGCCTTCACTACGTTCAATCCAGGCTCGAATCATTGGCGGAGCTTGAGAGGCTCCTCGCTGGAGCTCCTGTTGATTACCTCCGTGCCTATGTTTCCGACCTTGGTGATCACCGGGCGCTTGAGCAGCTCCGACGGATCCTACGGATACT...

Protein

Download Protein FASTA

795 aa · TkA02G373150|TK1151|PROTEIN

MGAIVTGDRYLESLVKFVEKQAGPLIEGTIVLKLNPVGLHYVQSRLESLAELERLLAGAPVDYLRAYVSDLGDHRALEQLRRILRILTSLKVISVLPPPSCRDPTPLCLLPFSRLKVLELRGCDLSTSAARGLLELRHTLEKIICHNSTDALRHVFASRIAEIEHSPHWKRLSFVSCAYNGLVLMDESLRLLPVVETLDLSRNKFTKVDNLLRCSKLKHLDLGFNQLRTIASFSKVTCQIVKLVLRNNALTTMRGVENLK...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA02G373150
TK1151 IDTkA02G373150
OH-1004 IDLXL04_015035
Relationship / confidenceRbh Sequence Supported / Probable
Protein identity (%)99.900
Protein coverage (%)TK1151 100.000 / OH-1004 77.789
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA02G373150
LocationChr02:94965349-94974072 (-)
DescriptionSimilar to stk11ip: Serine/threonine-protein kinase 11-interacting protein
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

No hit for this species in the current source table.

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_015035 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0008104 intracellular protein localization Biological Process
GO:0005576 extracellular region Cellular Component
GO:0005737 cytoplasm Cellular Component
GO:0005765 lysosomal membrane Cellular Component
GO:0035578 azurophil granule lumen Cellular Component
GO:0019901 protein kinase binding Molecular Function
GO:0140311 protein sequestering activity Molecular Function
KEGG gene cross-reference
gga:424195
hsa:114790
mmu:71728
xla:432019
xtr:394784
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cytoplasm0.525
Rank 1 · TkA02G373150 · TK1151
Nucleus0.291
Rank 2 · TkA02G373150 · TK1151
Cell membrane0.196
Rank 3 · TkA02G373150 · TK1151
Golgi apparatus0.111
Rank 4 · TkA02G373150 · TK1151
Endoplasmic reticulum0.075
Rank 5 · TkA02G373150 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF12799LRR_4114-150 aa
PF13855LRR_8114-125 aa
PF00560LRR_1114-128 aa
PF13516LRR_6115-130 aa
PF14580LRR_9160-220 aa
PF13855LRR_8186-227 aa
PF24048LRR_NXF1-5193-252 aa
PF12799LRR_4195-233 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA02G373150PF12799LRR_41141509e-1658.3
TkA02G373150PF13855LRR_81141252.1e-1040.9
TkA02G373150PF00560LRR_11141281.7e-0524.7
TkA02G373150PF13516LRR_61151300.00218.7
TkA02G373150PF14580LRR_91602201.9e-0628.3
TkA02G373150PF13855LRR_81862272.1e-1040.9
TkA02G373150PF24048LRR_NXF1-51932522.2e-0834.5
TkA02G373150PF12799LRR_41952339e-1658.3
TkA02G373150PF13855LRR_81952322.1e-1040.9
TkA02G373150PF13516LRR_61952060.00218.7
TkA02G373150PF14580LRR_91962661.9e-0628.3
TkA02G373150PF00560LRR_11962071.7e-0524.7
TkA02G373150PF13516LRR_62142270.00218.7
TkA02G373150PF00560LRR_12162291.7e-0524.7
TkA02G373150PF14580LRR_92223261.9e-0628.3
TkA02G373150PF12799LRR_42412799e-1658.3

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

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