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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkA02G345310
Reference: TK1151 Chr: Chr02 Coordinates: 87687111-87691185 Strand: + Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

2520 bp · TkA02G345310|TK1151|cDNA

AGTGGTCAAATGTGTACAAAATAAGAAGAATGTTACCATAATAGGTCATTTTCCCTTCTTTAACTAACTGTTAATATAGATGGGGTCCATTTTACAATTAAGATAGTTTAAAGGGCTGAAAGCAAACAATTCAAATCCAGCCGGTCACTGTTTAATTTGAAAACCGGCGCTTCTCTCTCTCATCATCGTCCCGCTTTCAGCTTTTTAGCTGAAGATGATACCTTTCAACATTTCCTGAATCTCTTTCATGGCCTCCACTA...

CDS

Download CDS FASTA

1134 bp · TkA02G345310|TK1151|CDS

ATGAACAGTGAGAGCAGCCGTTCACATAGTGTTTTCACATGCATTGTGGAAAGTCGTTGGGAAAAGGACTCCATGACACACCTTAGGTTTGGAAGGTTAAATTTGGTTGACCTAGCTGGCTCTGAAAGGCAGAGAAGTTGTGGAGCAGGAGAACGTGTGAAAGAAGCATCTTATATTAACAAATCACTATCAACTCTCGGTCTGGTAATTATGTCTCTGGTGGATGTTGCACATGGGAAACATAGACATGTACCTTACAG...

Protein

Download Protein FASTA

377 aa · TkA02G345310|TK1151|PROTEIN

MNSESSRSHSVFTCIVESRWEKDSMTHLRFGRLNLVDLAGSERQRSCGAGERVKEASYINKSLSTLGLVIMSLVDVAHGKHRHVPYRDSRLTFLLQDSLGGNSKTTIIANVSPSLCAASETLSTLKFAQRAKLIQNNAKVNEDASGDVTALQRQIQMLKEQMSLLLKHQKISKSLFHESCERQEEVSGEKNVCDIFRKTKQINQLALPKENVECTKMLLRFREEKIKRLELLTNGMISTDHYLMDENNALMEEIQQLRAR...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA02G345310
TK1151 IDTkA02G345310
OH-1004 IDLXL04_015348
Relationship / confidenceSequence Supported Annotation Or Model Conflict / Review
Protein identity (%)99.400
Protein coverage (%)TK1151 89.390 / OH-1004 17.802
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA02G345310
LocationChr02:87687111-87691185 (+)
DescriptionSimilar to KIN12C: Kinesin-like protein KIN-12C
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At3g17360 Involved in the spatial control of cytokinesis by a proper phragmoplast guidance.
Two kinesins are involved in the spatial control of cytokinesis in Arabidopsis thaliana.2006 · DOI: 10.1016/j.cub.2006.03.034
Tangled localization at the cortical division site of plant cells occurs by several mechanisms.2011 · DOI: 10.1242/jcs.073676
At3g19050 Involved in the spatial control of cytokinesis by a proper phragmoplast guidance.
Two kinesins are involved in the spatial control of cytokinesis in Arabidopsis thaliana.2006 · DOI: 10.1016/j.cub.2006.03.034

Rice

Reference gene IDPossible functionPapers / DOI
Os07g0638000 Kinesin-like protein KIN-12E. No verified direct reference in this release
Os12g0590500 Kinesin-like protein KIN-12F. No verified direct reference in this release
UniProt: Q75LL2 Kinesin-like protein KIN-12G. No verified direct reference in this release
Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_015348 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0000281 mitotic cytokinesis Biological Process
GO:0000911 cytokinesis by cell plate formation Biological Process
GO:0007018 microtubule-based movement Biological Process
GO:0005874 microtubule Cellular Component
GO:0009524 phragmoplast Cellular Component
GO:0032153 cell division site Cellular Component
GO:0003777 microtubule motor activity Molecular Function
GO:0005524 ATP binding Molecular Function
GO:0008017 microtubule binding Molecular Function
KEGG gene cross-reference
ath:AT3G17360
dosa:Os07g0638000
dosa:Os12g0590500
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cytoplasm0.624
Rank 1 · TkA02G345310 · TK1151
Nucleus0.285
Rank 2 · TkA02G345310 · TK1151
Golgi apparatus0.088
Rank 3 · TkA02G345310 · TK1151
Cell membrane0.081
Rank 4 · TkA02G345310 · TK1151
Mitochondrion0.075
Rank 5 · TkA02G345310 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF00225Kinesin1-134 aa
PF10504DUF2452131-183 aa
PF31275TEX51131-195 aa
PF27549HI_1622_C135-164 aa
PF03127GAT148-161 aa
PF02183HALZ150-162 aa
PF29521RKM2_C156-204 aa
PF29521RKM2_C222-289 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA02G345310PF00225Kinesin11342.3e-50172.2
TkA02G345310PF10504DUF24521311830.02814.6
TkA02G345310PF31275TEX511311955.37.4
TkA02G345310PF27549HI_1622_C1351641.29.8
TkA02G345310PF03127GAT1481610.3711.7
TkA02G345310PF02183HALZ1501620.06914.0
TkA02G345310PF29521RKM2_C1562040.5211.1
TkA02G345310PF29521RKM2_C2222890.5211.1
TkA02G345310PF02183HALZ2432600.06914.0
TkA02G345310PF03127GAT2462980.3711.7
TkA02G345310PF27549HI_1622_C2482721.29.8
TkA02G345310PF00225Kinesin2622972.3e-50172.2
TkA02G345310PF31275TEX512763535.37.4
TkA02G345310PF02183HALZ2782920.06914.0
TkA02G345310PF10504DUF24523143290.02814.6

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

ProteinOrganismDescriptionIdentityDatabaseConfidence
Q27IK7Arabidopsis thalianasp|Q27IK7|KN12C_ARATH Kinesin-like protein KIN-12C52.800%Swiss-ProtHigh
Q27IK6Arabidopsis thalianasp|Q27IK6|KN12D_ARATH Kinesin-like protein KIN-12D50.800%Swiss-ProtHigh
B9FUF9Oryza sativa subsp. japonicasp|B9FUF9|KN12E_ORYSJ Kinesin-like protein KIN-12E53.000%Swiss-ProtHigh
B9GE13Oryza sativa subsp. japonicasp|B9GE13|KN12F_ORYSJ Kinesin-like protein KIN-12F55.900%Swiss-ProtHigh
Q75LL2Oryza sativa subsp. japonicasp|Q75LL2|KN12G_ORYSJ Kinesin-like protein KIN-12G47.800%Swiss-ProtMedium

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