How to use this page

Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp

Gene overview

TkA02G148580
Reference: TK1151 Chr: Chr02 Coordinates: 38290790-38291419 Strand: + Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

372 bp · TkA02G148580|TK1151|cDNA

ATGAATACTCCCGACAACAGCAAAAGGAGTTCAAACATAGTCAACATCCATGGTGAAGAAGAACACAACTACCAAAACCATCCTCACCAAAATCCCGATCCACTACTTTTAGATAACGACCTCCTTCTATTGAAGCGCCATGATTCCTTAGACATGGAGTCCGCTAAAATTCAAGGCCACCATGGTCACCATGGCACCAAGATGTTGACTATGTTTGAACTCCTTTTGCTGTTGCCGGGAGTATTCATGTTGGAGTTTCT...

372 bp · TkA02G148580|TK1151|CDS

ATGAATACTCCCGACAACAGCAAAAGGAGTTCAAACATAGTCAACATCCATGGTGAAGAAGAACACAACTACCAAAACCATCCTCACCAAAATCCCGATCCACTACTTTTAGATAACGACCTCCTTCTATTGAAGCGCCATGATTCCTTAGACATGGAGTCCGCTAAAATTCAAGGCCACCATGGTCACCATGGCACCAAGATGTTGACTATGTTTGAACTCCTTTTGCTGTTGCCGGGAGTATTCATGTTGGAGTTTCT...

123 aa · TkA02G148580|TK1151|PROTEIN

MNTPDNSKRSSNIVNIHGEEEHNYQNHPHQNPDPLLLDNDLLLLKRHDSLDMESAKIQGHHGHHGTKMLTMFELLLLLPGVFMLEFLQLPPGVDMVVLRIPVRWKEEWEETFEKKRYYIEFCG

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

Download Gene (CDS) Download Protein

ID Mapping

Input IDTkA02G148580
TK1151 IDTkA02G148580
OH-1004 IDLXL04_037049
Relationship / confidenceNon Reciprocal Best Hit / Complex relationship
Protein identity (%)72.200
Protein coverage (%)TK1151 54.472 / OH-1004 9.836
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA02G148580
LocationChr02:38290790-38291419 (+)
DescriptionSimilar to POT5: Potassium transporter 5
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

No hit for this species in the current source table.

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_037049 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0006813 potassium ion transport Biological Process
GO:1901002 positive regulation of response to salt stress Biological Process
GO:1990573 potassium ion import across plasma membrane Biological Process
GO:0005634 nucleus Cellular Component
GO:0005886 plasma membrane Cellular Component
GO:0016020 membrane Cellular Component
GO:0009674 potassium:sodium symporter activity Molecular Function
GO:0015079 potassium ion transmembrane transporter activity Molecular Function
KEGG gene cross-reference
ath:AT4G13420
dosa:Os01g0930400
dosa:Os02g0518600
dosa:Os02g0519100
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Nucleus0.414
Rank 1 · TkA02G148580 · TK1151
Cytoplasm0.394
Rank 2 · TkA02G148580 · TK1151
Mitochondrion0.133
Rank 3 · TkA02G148580 · TK1151
Cell membrane0.119
Rank 4 · TkA02G148580 · TK1151
Endoplasmic reticulum0.085
Rank 5 · TkA02G148580 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Predicted Functional Domains

No result was found for this query.

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

No result was found for this query.

JBrowse

View in Genome Browser