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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkA02G065620
Reference: TK1151 Chr: Chr02 Coordinates: 17013825-17020316 Strand: + Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

2980 bp · TkA02G065620|TK1151|cDNA

TTACATCTAGTTTATTCTAAACCATGAAGTTCACGAGTTCATGATGTAAATTACTCTTAAGCTAACTTTTAGGGAAATCAACTTTCAAGCTGGCTTGGGCGGTAATCAAAACACCTCCACACGTCTCCCTTTTCTCTAGAATCTCTTTTTCAAAACACACACACACCTGCTCGCAATTCCACCTAGGGTTTCAACACACTCGCTCAAATTTCAGTTCGATCGATCGATCTCCATTCCAATGGGCGACGAACCAATGACTC...

CDS

Download CDS FASTA

2511 bp · TkA02G065620|TK1151|CDS

ATGGGCGACGAACCAATGACTCCTTCAACATCTCAACAGCAACAGCCTCCGCCGCAAACTAATGCCAACGCCGCTCCTCTTGGCCACAACGTCATCCCAATCGTCAACAAGCTCCAAGATATATTCGCTCAACTCGGAAGCTCGTCTACTGTTGAGCTCCCTCAGGTTGCCGTTGTAGGTAGCCAGAGTAGTGGTAAATCTAGTGTGCTTGAAGCTCTTGTAGGCCGGGATTTTTTGCCCAGGGGTTCTGATATCTGTAC...

Protein

Download Protein FASTA

836 aa · TkA02G065620|TK1151|PROTEIN

MGDEPMTPSTSQQQQPPPQTNANAAPLGHNVIPIVNKLQDIFAQLGSSSTVELPQVAVVGSQSSGKSSVLEALVGRDFLPRGSDICTRRPLVLQLLQIKRKPDGTDEEYGEFLHVPGKRFHDFNEIRREIQAETDREAGGNKGVSDKQIRLKIFSPNVLDITLVDLPGITKVPVGDQPSDIEARIRTMIMSYIKTPSCLILAVTPANSDLANSDALQIAGNADPDGYRTIGVITKLDIMDRGTDARNFLLGKVIPLRLGY...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA02G065620
TK1151 IDTkA02G065620
OH-1004 IDLXL04_017222
Relationship / confidenceRbh High Identity Coverage Synteny / Strict
Protein identity (%)99.200
Protein coverage (%)TK1151 100.000 / OH-1004 86.378
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA02G065620
LocationChr02:17013825-17020316 (+)
DescriptionSimilar to DRP3A: Dynamin-related protein 3A
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At4g33650 Involved in the control of mitochondrial and peroxisomal division and morphology.
ADL2a, like ADL2b, is involved in the control of higher plant mitochondrial morphology.2004 · DOI: 10.1093/jxb/erh073
Arabidopsis dynamin-like protein 2a (ADL2a), like ADL2b, is involved in plant mitochondrial division.2004 · DOI: 10.1093/pcp/pch024
Arabidopsis PEROXIN11c-e, FISSION1b, and DYNAMIN-RELATED PROTEIN3A cooperate in cell cycle-associated replication of peroxisomes.2008 · DOI: 10.1105/tpc.107.057679
Two small protein families, DYNAMIN-RELATED PROTEIN3 and FISSION1, are required for peroxisome fission in Arabidopsis.2009 · DOI: 10.1111/j.1365-313x.2008.03677.x
At2g14120 Involved in the control of mitochondrial and peroxisomal division and morphology.
ADL2a, like ADL2b, is involved in the control of higher plant mitochondrial morphology.2004 · DOI: 10.1093/jxb/erh073
Arabidopsis dynamin-like protein 2a (ADL2a), like ADL2b, is involved in plant mitochondrial division.2004 · DOI: 10.1093/pcp/pch024
Two small protein families, DYNAMIN-RELATED PROTEIN3 and FISSION1, are required for peroxisome fission in Arabidopsis.2009 · DOI: 10.1111/j.1365-313x.2008.03677.x

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_017222 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0000001 mitochondrion inheritance Biological Process
GO:0000266 mitochondrial fission Biological Process
GO:0006816 calcium ion transport Biological Process
GO:0006897 endocytosis Biological Process
GO:0007005 mitochondrion organization Biological Process
GO:0007031 peroxisome organization Biological Process
GO:0010468 regulation of gene expression Biological Process
GO:0010637 negative regulation of mitochondrial fusion Biological Process
GO:0010821 regulation of mitochondrion organization Biological Process
GO:0015886 heme transport Biological Process
GO:0016050 vesicle organization Biological Process
GO:0016236 macroautophagy Biological Process
KEGG gene cross-reference
ath:AT2G14120
ath:AT4G33650
hsa:10059
mmu:74006
sce:YLL001W
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cytoplasm0.437
Rank 1 · TkA02G065620 · TK1151
Peroxisome0.232
Rank 2 · TkA02G065620 · TK1151
Nucleus0.169
Rank 3 · TkA02G065620 · TK1151
Mitochondrion0.150
Rank 4 · TkA02G065620 · TK1151
Cell membrane0.101
Rank 5 · TkA02G065620 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF13191AAA_1637-74 aa
PF25683URGCP_GTPase41-100 aa
PF01926MMR_HSR155-204 aa
PF00350Dynamin_N56-236 aa
PF13304AAA_2157-73 aa
PF13175AAA_1557-73 aa
PF02212GED184-194 aa
PF01031Dynamin_M244-530 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA02G065620PF13191AAA_1637740.02615.8
TkA02G065620PF25683URGCP_GTPase411000.008415.6
TkA02G065620PF01926MMR_HSR1552040.000222.1
TkA02G065620PF00350Dynamin_N562364.7e-55186.9
TkA02G065620PF13304AAA_2157730.06214.0
TkA02G065620PF13175AAA_1557730.1911.9
TkA02G065620PF02212GED1841945.9e-2794.4
TkA02G065620PF01031Dynamin_M2445301e-105353.8
TkA02G065620PF02212GED4594775.9e-2794.4
TkA02G065620PF13304AAA_216226690.06214.0
TkA02G065620PF13175AAA_156237230.1911.9
TkA02G065620PF02212GED6607505.9e-2794.4
TkA02G065620PF13191AAA_167007410.02615.8
TkA02G065620PF13304AAA_217388080.06214.0

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

ProteinOrganismDescriptionIdentityDatabaseConfidence
Q8S944Arabidopsis thalianasp|Q8S944|DRP3A_ARATH Dynamin-related protein 3A70.500%Swiss-ProtHigh
Q8LFT2Arabidopsis thalianasp|Q8LFT2|DRP3B_ARATH Dynamin-related protein 3B71.300%Swiss-ProtHigh

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