Gene Card
Gene overview
cDNA / CDS / Protein Sequences
2927 bp · LXL04_017222|LXL04_017222|OH1004|cDNA
ATAAAAGAAATCAACCAATGACTTCCAGTTCAATTGGTTCGAGGTACCGGGTTATAGTCTTGCGTGGGGCAAAGGTCAGGGGTTCGATCCCCGGCTGGAGCAACATGTGGGGATTTTCCCCAGAACGTGCAAGCCAGGTAAGAGGTCGCATGCGTATCCGTGAAGCCCCTATAATGGGAAACTGGGTGGAGCGCTGTGGCGTGGTTTGCTTCCAGGACTCGAACCTGGGTCCTTCGGGACAAAGCGCACGGGCGACCATT...
2910 bp · LXL04_017222|LXL04_017222|OH1004|CDS
ATGACTTCCAGTTCAATTGGTTCGAGGTACCGGGTTATAGTCTTGCGTGGGGCAAAGGTCAGGGGTTCGATCCCCGGCTGGAGCAACATGTGGGGATTTTCCCCAGAACGTGCAAGCCAGGTAAGAGGTCGCATGCGTATCCGTGAAGCCCCTATAATGGGAAACTGGGTGGAGCGCTGTGGCGTGGTTTGCTTCCAGGACTCGAACCTGGGTCCTTCGGGACAAAGCGCACGGGCGACCATTCGGGATCCGCTGCGCTG...
Protein
Download Protein FASTA969 aa · LXL04_017222|LXL04_017222|OH1004|PROTEIN
MTSSSIGSRYRVIVLRGAKVRGSIPGWSNMWGFSPERASQVRGRMRIREAPIMGNWVERCGVVCFQDSNLGPSGQSARATIRDPLRCLAVQKKKDKRNQNLFFKTHTHLLAIPPRVSTHSLKFQFDRSISIPMGDEPMTPSTSQQQQPPPQTNANAAPLGHNVIPIVNKLQDIFAQLGSSSTVELPQVAVVGSQSSGKSSVLEALVGRDFLPRGSDICTRRPLVLQLLQIKRKPDGTDEEYGEFLHVPGKRFHDFNEIRR...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | LXL04_017222 |
|---|---|
| Source version | OH-1004 / GCA_047496595.1_OSU_TarKok_2.0 |
SNP / Indel variants and carrier samplesCRA009020 · OH-1004
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | LXL04_017222 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Location | Chr03:143953867-143960602 (-) | |||||||||
| Description | Similar to DRP3A: Dynamin-related protein 3A | |||||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
RiceNo hit for this species in the current source table. | |||||||||
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | |||||||||
| GO annotations (OH1004 source) | GO:0000001 mitochondrion inheritance Biological Process GO:0000266 mitochondrial fission Biological Process GO:0006816 calcium ion transport Biological Process GO:0006897 endocytosis Biological Process GO:0007005 mitochondrion organization Biological Process GO:0007031 peroxisome organization Biological Process GO:0010468 regulation of gene expression Biological Process GO:0010637 negative regulation of mitochondrial fusion Biological Process GO:0010821 regulation of mitochondrion organization Biological Process GO:0015886 heme transport Biological Process GO:0016050 vesicle organization Biological Process GO:0016236 macroautophagy Biological Process | |||||||||
| KEGG gene cross-reference | ath:AT2G14120 ath:AT4G33650 hsa:10059 mmu:74006 sce:YLL001W These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF00350.30Dynamin_N188-368 aaPF01031.26Dynamin_M376-663 aaPF02212.24GED793-883 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| LXL04_017222 | PF00350.30 | Dynamin_N | 188 | 368 | 6.9e-55 | 186.3 |
| LXL04_017222 | PF01031.26 | Dynamin_M | 376 | 663 | 4.2e-103 | 345.2 |
| LXL04_017222 | PF02212.24 | GED | 793 | 883 | 5.4e-27 | 94.5 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.