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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkA01G390590
Reference: TK1151 Chr: Chr01 Coordinates: 97523617-97527426 Strand: + Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

2397 bp · TkA01G390590|TK1151|cDNA

CTTGACTGTTTTATAATGTGGCGTCAAAGAAGACAAGAAAGAGAAACCCAAAGACAGATCAACCCAGCTGTCATACAAATAGCCGATCTAGTTTATGGGGTTTTTATATACCCCTTTACACCAGATTAAAACCCTACCTATCATCATCTATACATACATACATACATACATACTACAGGTTACTTGGTGACTTGATGCTGATGAGGTAAACCAAAAAGGGGCTCCGGAGGTTTCCATTTTAGCTGTAATATTCTTATTTG...

CDS

Download CDS FASTA

1554 bp · TkA01G390590|TK1151|CDS

ATGGAGGAGGGAGTGCAAGGAGGAGACGATGAAATTCTGGGGTCAAGCTTGACCATGGAGAAAGTGGCTGCTGCTAAGCAATTCATAGAGAATCACTACAAAACTCAGATGAAGAACATTCAGGAACGCAAAGAAAGGCGATGGATCTTAGAGAGGAAGTTGGCTTCTTCAGATGTACCTAAAGAAGAACAGATTAATCTGATCAAGGATTTAGAGAGAAAGGAAACAGAGTTTATGCGACTTAAAAGGAACAAAATATG...

Protein

Download Protein FASTA

517 aa · TkA01G390590|TK1151|PROTEIN

MEEGVQGGDDEILGSSLTMEKVAAAKQFIENHYKTQMKNIQERKERRWILERKLASSDVPKEEQINLIKDLERKETEFMRLKRNKICVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMLVRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIMEYLPGGDMMTLLMREDTLKENVAKFYIAQSVMAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCRTLSTLNENEAMSDENIRV...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA01G390590
TK1151 IDTkA01G390590
OH-1004 IDLXL04_003117
Relationship / confidenceMulti Source To Oh1004 / Complex relationship
Protein identity (%)99.800
Protein coverage (%)TK1151 100.000 / OH-1004 100.000
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA01G390590
LocationChr01:97523617-97527426 (+)
DescriptionSimilar to CBK1: Serine/threonine-protein kinase CBK1 (Candida albicans (strain SC5314 / ATCC MYA-2876)
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

No hit for this species in the current source table.

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_003117 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0000077 DNA damage checkpoint signaling Biological Process
GO:0000902 cell morphogenesis Biological Process
GO:0000920 septum digestion after cytokinesis Biological Process
GO:0006357 regulation of transcription by RNA polymerase II Biological Process
GO:0006468 protein phosphorylation Biological Process
GO:0006974 DNA damage response Biological Process
GO:0007118 budding cell apical bud growth Biological Process
GO:0007163 establishment or maintenance of cell polarity Biological Process
GO:0009267 cellular response to starvation Biological Process
GO:0030447 filamentous growth Biological Process
GO:0030866 cortical actin cytoskeleton organization Biological Process
GO:0030950 establishment or maintenance of actin cytoskeleton polarity Biological Process
KEGG gene cross-reference
bta:533677
cal:CAALFM_C110380CA
hsa:11329
pon:100173048
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cytoplasm0.582
Rank 1 · TkA01G390590 · TK1151
Nucleus0.515
Rank 2 · TkA01G390590 · TK1151
Cell membrane0.110
Rank 3 · TkA01G390590 · TK1151
Mitochondrion0.042
Rank 4 · TkA01G390590 · TK1151
Endoplasmic reticulum0.031
Rank 5 · TkA01G390590 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF03232COQ712-77 aa
PF06589CRA25-92 aa
PF06293Kdo26-51 aa
PF00069Pkinase92-241 aa
PF07714PK_Tyr_Ser-Thr93-242 aa
PF01636APH133-208 aa
PF12330Haspin_kinase136-236 aa
PF03109ABC1162-244 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA01G390590PF03232COQ712770.01415.8
TkA01G390590PF06589CRA25920.004317.8
TkA01G390590PF06293Kdo26510.1112.6
TkA01G390590PF00069Pkinase922412.7e-66224.4
TkA01G390590PF07714PK_Tyr_Ser-Thr932422.8e-29102.9
TkA01G390590PF01636APH1332080.0003921.0
TkA01G390590PF12330Haspin_kinase1362360.003517.1
TkA01G390590PF03109ABC11622447.2e-0832.6
TkA01G390590PF06293Kdo1662330.1112.6
TkA01G390590PF14531Kinase-like1852340.008916.0
TkA01G390590PF07387Seadorna_VP71962330.003117.3
TkA01G390590PF01636APH2112280.0003921.0
TkA01G390590PF00069Pkinase2893982.7e-66224.4
TkA01G390590PF07714PK_Tyr_Ser-Thr3023612.8e-29102.9
TkA01G390590PF14531Kinase-like3183330.008916.0
TkA01G390590PF00433Pkinase_C4174611.2e-0733.1

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

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