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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkA01G320850
Reference: TK1151 Chr: Chr01 Coordinates: 79665215-79666063 Strand: - Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

849 bp · TkA01G320850|TK1151|cDNA

ATGGCAGAGGCTTTCCTTCAAATGGTCCTACAAAATCTGAGCTCACTCATCCATGATGAGATCGGATTGATTATGGGCGTAGACGAGGAGATGAAGAAGCTTTTGAGCACCTTCACCACCATCCAAGCTGTTCTTGAAGATGCTGAAATCAAGAAACTCAAAGACAAGGCCATCGAAAATTGGCTATGCAAGCTCAAAGACCTTGCTTTTGAGATTGATGATATACTTGATGAGTGTGCTATCCATGTCTCAAGGCTGAA...

CDS

Download CDS FASTA

849 bp · TkA01G320850|TK1151|CDS

ATGGCAGAGGCTTTCCTTCAAATGGTCCTACAAAATCTGAGCTCACTCATCCATGATGAGATCGGATTGATTATGGGCGTAGACGAGGAGATGAAGAAGCTTTTGAGCACCTTCACCACCATCCAAGCTGTTCTTGAAGATGCTGAAATCAAGAAACTCAAAGACAAGGCCATCGAAAATTGGCTATGCAAGCTCAAAGACCTTGCTTTTGAGATTGATGATATACTTGATGAGTGTGCTATCCATGTCTCAAGGCTGAA...

Protein

Download Protein FASTA

282 aa · TkA01G320850|TK1151|PROTEIN

MAEAFLQMVLQNLSSLIHDEIGLIMGVDEEMKKLLSTFTTIQAVLEDAEIKKLKDKAIENWLCKLKDLAFEIDDILDECAIHVSRLKPRTCKLSCYSLKNVVFRHKIGRRMKHVSEKLDSVSAERAKFHLREMLAVERTSEVDGARETGSILNESHQIYGRDGDKEKIVDILVNVVKENQQISVLPILGVGGLGKTTLAQIVYDDCRVVEHFETKLWVYVSDNFDAKTLVRAVIESATGSGSASDLVQLDTLQRRLRELL...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA01G320850
TK1151 IDTkA01G320850
OH-1004 IDLXL04_013681
Relationship / confidenceNon Reciprocal Best Hit / Complex relationship
Protein identity (%)34.700
Protein coverage (%)TK1151 96.454 / OH-1004 27.996
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA01G320850
LocationChr01:79665215-79666063 (-)
DescriptionSimilar to RGA2: Disease resistance protein RGA2
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At3g14470 Potential disease resistance protein. No verified direct reference in this release

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_013681 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0051607 defense response to virus Biological Process
GO:0098542 defense response to other organism Biological Process
GO:0005576 extracellular region Cellular Component
GO:0005524 ATP binding Molecular Function
GO:0043531 ADP binding Molecular Function
KEGG gene cross-reference
ath:AT3G14470
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cell membrane0.599
Rank 1 · TkA01G320850 · TK1151
Endoplasmic reticulum0.237
Rank 2 · TkA01G320850 · TK1151
Cytoplasm0.114
Rank 3 · TkA01G320850 · TK1151
Lysosome / Vacuole0.097
Rank 4 · TkA01G320850 · TK1151
Golgi apparatus0.046
Rank 5 · TkA01G320850 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF05659RPW82-69 aa
PF18052Rx_N5-92 aa
PF05496RuvB_N12-70 aa
PF20720nSTAND331-82 aa
PF24883NPHP3_N41-80 aa
PF00931NB-ARC54-78 aa
PF25199nSTAND_NTPase5119-145 aa
PF13191AAA_16158-236 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA01G320850PF05659RPW82690.1312.6
TkA01G320850PF18052Rx_N5929.1e-2690.5
TkA01G320850PF05496RuvB_N12700.03514.6
TkA01G320850PF20720nSTAND331820.2411.8
TkA01G320850PF24883NPHP3_N41800.03515.0
TkA01G320850PF00931NB-ARC54781.3e-1351.6
TkA01G320850PF25199nSTAND_NTPase51191450.1612.5
TkA01G320850PF13191AAA_161582360.03715.3
TkA01G320850PF00931NB-ARC1652641.3e-1351.6
TkA01G320850PF25199nSTAND_NTPase51672270.1612.5
TkA01G320850PF05496RuvB_N1702080.03514.6
TkA01G320850PF25201nSTAND61712350.1812.6
TkA01G320850PF24883NPHP3_N1782360.03515.0
TkA01G320850PF20720nSTAND31792060.2411.8

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

ProteinOrganismDescriptionIdentityDatabaseConfidence
Q9LRR4Arabidopsis thalianasp|Q9LRR4|R13L1_ARATH Putative disease resistance RPP13-like protein 132.000%Swiss-ProtMedium

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