Gene Card
Gene overview
cDNA / CDS / Protein Sequences
1059 bp · LXL04_030173|LXL04_030173|OH1004|cDNA
ATGGAATTTTCTGCCTTACACTTGCACACTTCCTTTTTTCGCATGGGGTTTGAAGAAGAAGCCATCGCAGAAGGAAGGAAGGAGGTTCGATCGCGATTGCTGAATGTGAAGAGAGAGAGGCTGAATGTGTTGTTACCGGTTCGATCGCGATCGCAGAAGGAAGGAAGGAAGGAGCTTCGATCGCTGAAGGAGGTTCGATTGCTGAATGTGTTGTTACCGGTTCCTTTGTCAAATAACAAGTTTCTTCCATCTCCTCTTTT...
1059 bp · LXL04_030173|LXL04_030173|OH1004|CDS
ATGGAATTTTCTGCCTTACACTTGCACACTTCCTTTTTTCGCATGGGGTTTGAAGAAGAAGCCATCGCAGAAGGAAGGAAGGAGGTTCGATCGCGATTGCTGAATGTGAAGAGAGAGAGGCTGAATGTGTTGTTACCGGTTCGATCGCGATCGCAGAAGGAAGGAAGGAAGGAGCTTCGATCGCTGAAGGAGGTTCGATTGCTGAATGTGTTGTTACCGGTTCCTTTGTCAAATAACAAGTTTCTTCCATCTCCTCTTTT...
Protein
Download Protein FASTA352 aa · LXL04_030173|LXL04_030173|OH1004|PROTEIN
MEFSALHLHTSFFRMGFEEEAIAEGRKEVRSRLLNVKRERLNVLLPVRSRSQKEGRKELRSLKEVRLLNVLLPVPLSNNKFLPSPLFKICSSTKIPPSMAAIPTLPENLTREQYVYMAKLAEQAERYEEMVKFMEKLVVGLTPASELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEESRKNDDHVVLVKDYRSKVENELKDLCAGILKLLESNLVPSASSGESKVFYLKMKGDYHRYLAEFEVGDERKEAAEDAMN...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | LXL04_030173 |
|---|---|
| Source version | OH-1004 / GCA_047496595.1_OSU_TarKok_2.0 |
SNP / Indel variants and carrier samplesCRA009020 · OH-1004
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | LXL04_030173 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Location | Chr06:110103961-110106712 (-) | |||||||||
| Description | Similar to TFT10: 14-3-3 protein 10 | |||||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
RiceNo hit for this species in the current source table. | |||||||||
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | |||||||||
| GO annotations (OH1004 source) | GO:0007165 signal transduction Biological Process GO:0008104 intracellular protein localization Biological Process GO:0009409 response to cold Biological Process GO:0009742 brassinosteroid mediated signaling pathway Biological Process GO:0019222 regulation of metabolic process Biological Process GO:0045732 positive regulation of protein catabolic process Biological Process GO:0050826 response to freezing Biological Process GO:0005634 nucleus Cellular Component GO:0005737 cytoplasm Cellular Component GO:0005829 cytosol Cellular Component GO:0005886 plasma membrane Cellular Component GO:0009505 plant-type cell wall Cellular Component | |||||||||
| KEGG gene cross-reference | ath:AT5G10450 ath:AT5G65430 sly:544116 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF00244.2714-3-3117-342 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| LXL04_030173 | PF00244.27 | 14-3-3 | 117 | 342 | 2.2e-101 | 338.8 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.