基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | LXL04_017960 |
|---|---|
| 当前查询版本 | OH1004 |
| 位置 | Chr04:4299634-4306177 (+) |
| 描述 | Similar to LIG4: DNA ligase 4 (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源：OH1004 · LXL04_017960 · GCA_047496595.1_OSU_TarKok_2.0。
当前查询返回来自 OH1004 注释条目的 35 条 GO 注释和 3 条 KEGG 基因交叉引用；只下载当前查询结果，不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因；橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At5g57160 |
DNA 连接酶参与 DNA 非同源末端连接。 |
水稻
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
Os04g0606450 |
DNA 连接酶参与 DNA 非同源末端连接 (NHEJ)；双链断裂 (DSB) 修复所需。 | 暂无已核实直接文献 |
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目，保留原始同源转移证据及覆盖度；其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0000012 | single strand break repair | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=32.173; 覆盖度=79.132; E 值=1.8e-136; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006284 | base-excision repair | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=32.173; 覆盖度=79.132; E 值=1.8e-136; UniProt GO evidence=IDA:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006297 | nucleotide-excision repair, DNA gap filling | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=59.311; 覆盖度=101.753; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006302 | double-strand break repair | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=59.311; 覆盖度=101.753; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006303 | double-strand break repair via nonhomologous end joining | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=59.311; 覆盖度=101.753; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006310 | DNA recombination | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=59.311; 覆盖度=101.753; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006974 | DNA damage response | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=59.311; 覆盖度=101.753; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008283 | cell population proliferation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=32.173; 覆盖度=79.132; E 值=1.8e-136; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010165 | response to X-ray | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=59.311; 覆盖度=101.753; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010212 | response to ionizing radiation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=32.313; 覆盖度=79.048; E 值=9.56e-137; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010332 | response to gamma radiation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=32.173; 覆盖度=79.132; E 值=1.8e-136; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035019 | somatic stem cell population maintenance | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=32.173; 覆盖度=79.132; E 值=1.8e-136; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048146 | positive regulation of fibroblast proliferation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=32.173; 覆盖度=79.132; E 值=1.8e-136; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051276 | chromosome organization | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=32.173; 覆盖度=79.132; E 值=1.8e-136; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051301 | cell division | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=32.313; 覆盖度=79.048; E 值=9.56e-137; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071479 | cellular response to ionizing radiation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=32.173; 覆盖度=79.132; E 值=1.8e-136; UniProt GO evidence=IGI:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071897 | DNA biosynthetic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=59.311; 覆盖度=101.753; E 值=0.0; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0075713 | establishment of integrated proviral latency | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=32.173; 覆盖度=79.132; E 值=1.8e-136; UniProt GO evidence=TAS:Reactome | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0097680 | double-strand break repair via classical nonhomologous end joining | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=61.517; 覆盖度=59.432; E 值=0.0; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2001252 | positive regulation of chromosome organization | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=32.173; 覆盖度=79.132; E 值=1.8e-136; UniProt GO evidence=IMP:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000781 | chromosome, telomeric region | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=32.173; 覆盖度=79.132; E 值=1.8e-136; UniProt GO evidence=IC:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000793 | condensed chromosome | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=32.173; 覆盖度=79.132; E 值=1.8e-136; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=59.311; 覆盖度=101.753; E 值=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=32.173; 覆盖度=79.132; E 值=1.8e-136; UniProt GO evidence=IDA:HPA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005958 | DNA-dependent protein kinase-DNA ligase 4 complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=32.313; 覆盖度=79.048; E 值=9.56e-137; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009506 | plasmodesma | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=59.311; 覆盖度=101.753; E 值=0.0; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032807 | DNA ligase IV complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=59.311; 覆盖度=101.753; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070419 | nonhomologous end joining complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=32.313; 覆盖度=79.048; E 值=9.56e-137; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000287 | magnesium ion binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=32.173; 覆盖度=79.132; E 值=1.8e-136; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=59.311; 覆盖度=101.753; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003909 | DNA ligase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=32.173; 覆盖度=79.132; E 值=1.8e-136; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003910 | DNA ligase (ATP) activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=59.311; 覆盖度=101.753; E 值=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005524 | ATP binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=59.311; 覆盖度=101.753; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016874 | ligase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=32.173; 覆盖度=79.132; E 值=1.8e-136; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046872 | metal ion binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=59.311; 覆盖度=101.753; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT5G57160 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=59.311; 覆盖度=101.753; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:3981 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=32.173; 覆盖度=79.132; E 值=1.8e-136 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | pon:100173511 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=32.313; 覆盖度=79.048; E 值=9.56e-137 | UniProtKB/Swiss-Prot DAT 2026 current_release |