query gene_id record_type id name namespace_or_position evidence source query_reference annotation_reference annotation_gene_id annotation_assembly mapping_category mapped_annotation LXL04_017960 LXL04_017960 function LXL04_017960 Similar to LIG4: DNA ligase 4 (Arabidopsis thaliana OX%3D3702) GFF-derived GCA_047496595.1_OSU_TarKok_2.0 OH1004 OH1004 LXL04_017960 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_017960 LXL04_017960 GO GO:0000012 single strand break repair biological_process Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=32.173; coverage=79.132; evalue=1.8e-136; UniProt GO evidence=IDA:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_017960 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_017960 LXL04_017960 GO GO:0006284 base-excision repair biological_process Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=32.173; coverage=79.132; evalue=1.8e-136; UniProt GO evidence=IDA:BHF-UCL UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_017960 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_017960 LXL04_017960 GO GO:0006297 nucleotide-excision repair, DNA gap filling biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=59.311; coverage=101.753; evalue=0.0; UniProt GO evidence=IBA:GO_Central UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_017960 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_017960 LXL04_017960 GO GO:0006302 double-strand break repair biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=59.311; coverage=101.753; evalue=0.0; UniProt GO evidence=IMP:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_017960 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_017960 LXL04_017960 GO GO:0006303 double-strand break repair via nonhomologous end joining biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=59.311; coverage=101.753; evalue=0.0; UniProt GO evidence=IMP:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_017960 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_017960 LXL04_017960 GO GO:0006310 DNA recombination biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=59.311; coverage=101.753; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_017960 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_017960 LXL04_017960 GO GO:0006974 DNA damage response biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=59.311; coverage=101.753; evalue=0.0; UniProt GO evidence=IMP:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_017960 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_017960 LXL04_017960 GO GO:0008283 cell population proliferation biological_process Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=32.173; coverage=79.132; evalue=1.8e-136; UniProt GO evidence=ISS:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_017960 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_017960 LXL04_017960 GO GO:0010165 response to X-ray biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=59.311; coverage=101.753; evalue=0.0; UniProt GO evidence=IMP:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_017960 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_017960 LXL04_017960 GO GO:0010212 response to ionizing radiation biological_process Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=32.313; coverage=79.048; evalue=9.56e-137; UniProt GO evidence=IEA:UniProtKB-ARBA UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_017960 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_017960 LXL04_017960 GO GO:0010332 response to gamma radiation biological_process Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=32.173; coverage=79.132; evalue=1.8e-136; UniProt GO evidence=ISS:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_017960 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_017960 LXL04_017960 GO GO:0035019 somatic stem cell population maintenance biological_process Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=32.173; coverage=79.132; evalue=1.8e-136; UniProt GO evidence=ISS:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_017960 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_017960 LXL04_017960 GO GO:0048146 positive regulation of fibroblast proliferation biological_process Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=32.173; coverage=79.132; evalue=1.8e-136; UniProt GO evidence=ISS:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_017960 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_017960 LXL04_017960 GO GO:0051276 chromosome organization biological_process Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=32.173; coverage=79.132; evalue=1.8e-136; UniProt GO evidence=ISS:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_017960 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_017960 LXL04_017960 GO GO:0051301 cell division biological_process Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=32.313; coverage=79.048; evalue=9.56e-137; UniProt GO evidence=IEA:UniProtKB-KW UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_017960 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_017960 LXL04_017960 GO GO:0071479 cellular response to ionizing radiation biological_process Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=32.173; coverage=79.132; evalue=1.8e-136; UniProt GO evidence=IGI:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_017960 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_017960 LXL04_017960 GO GO:0071897 DNA biosynthetic process biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=59.311; coverage=101.753; evalue=0.0; UniProt GO evidence=IEA:InterPro UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_017960 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_017960 LXL04_017960 GO GO:0075713 establishment of integrated proviral latency biological_process Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=32.173; coverage=79.132; evalue=1.8e-136; UniProt GO evidence=TAS:Reactome UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_017960 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_017960 LXL04_017960 GO GO:0097680 double-strand break repair via classical nonhomologous end joining biological_process Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=61.517; coverage=59.432; evalue=0.0; UniProt GO evidence=ISS:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_017960 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_017960 LXL04_017960 GO GO:2001252 positive regulation of chromosome organization biological_process Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=32.173; coverage=79.132; evalue=1.8e-136; UniProt GO evidence=IMP:BHF-UCL UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_017960 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_017960 LXL04_017960 GO GO:0000781 chromosome, telomeric region cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=32.173; coverage=79.132; evalue=1.8e-136; UniProt GO evidence=IC:BHF-UCL UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_017960 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_017960 LXL04_017960 GO GO:0000793 condensed chromosome cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=32.173; coverage=79.132; evalue=1.8e-136; UniProt GO evidence=IDA:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_017960 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_017960 LXL04_017960 GO GO:0005634 nucleus cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=59.311; coverage=101.753; evalue=0.0; UniProt GO evidence=ISM:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_017960 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_017960 LXL04_017960 GO GO:0005654 nucleoplasm cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=32.173; coverage=79.132; evalue=1.8e-136; UniProt GO evidence=IDA:HPA UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_017960 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_017960 LXL04_017960 GO GO:0005958 DNA-dependent protein kinase-DNA ligase 4 complex cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=32.313; coverage=79.048; evalue=9.56e-137; UniProt GO evidence=ISS:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_017960 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_017960 LXL04_017960 GO GO:0009506 plasmodesma cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=59.311; coverage=101.753; evalue=0.0; UniProt GO evidence=HDA:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_017960 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_017960 LXL04_017960 GO GO:0032807 DNA ligase IV complex cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=59.311; coverage=101.753; evalue=0.0; UniProt GO evidence=IBA:GO_Central UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_017960 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_017960 LXL04_017960 GO GO:0070419 nonhomologous end joining complex cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=32.313; coverage=79.048; evalue=9.56e-137; UniProt GO evidence=ISS:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_017960 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_017960 LXL04_017960 GO GO:0000287 magnesium ion binding molecular_function Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=32.173; coverage=79.132; evalue=1.8e-136; UniProt GO evidence=IDA:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_017960 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_017960 LXL04_017960 GO GO:0003677 DNA binding molecular_function Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=59.311; coverage=101.753; evalue=0.0; UniProt GO evidence=IBA:GO_Central UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_017960 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_017960 LXL04_017960 GO GO:0003909 DNA ligase activity molecular_function Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=32.173; coverage=79.132; evalue=1.8e-136; UniProt GO evidence=IDA:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_017960 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_017960 LXL04_017960 GO GO:0003910 DNA ligase (ATP) activity molecular_function Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=59.311; coverage=101.753; evalue=0.0; UniProt GO evidence=IDA:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_017960 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_017960 LXL04_017960 GO GO:0005524 ATP binding molecular_function Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=59.311; coverage=101.753; evalue=0.0; UniProt GO evidence=IBA:GO_Central UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_017960 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_017960 LXL04_017960 GO GO:0016874 ligase activity molecular_function Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=32.173; coverage=79.132; evalue=1.8e-136; UniProt GO evidence=IDA:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_017960 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_017960 LXL04_017960 GO GO:0046872 metal ion binding molecular_function Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=59.311; coverage=101.753; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_017960 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_017960 LXL04_017960 KEGG ath:AT5G57160 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=59.311; coverage=101.753; evalue=0.0 UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_017960 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_017960 LXL04_017960 KEGG hsa:3981 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=32.173; coverage=79.132; evalue=1.8e-136 UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_017960 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_017960 LXL04_017960 KEGG pon:100173511 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=32.313; coverage=79.048; evalue=9.56e-137 UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_017960 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_017960 LXL04_017960 organism_homology Q9LL84 DNA ligase 4 OS=Arabidopsis thaliana OX=3702 GN=LIG4 PE=1 SV=1 Arabidopsis thaliana identity=59.311; coverage=93.489; evalue=0.0; rank=1 OH-1004 Swiss-Prot homology; source_gene=LXL04_017960; source_db=UniProt Swiss-Prot current_release 2026-06-10 OH1004 OH1004 LXL04_017960 False LXL04_017960 LXL04_017960 organism_homology Q7X7E9 Putative DNA ligase 4 OS=Oryza sativa subsp. japonica OX=39947 GN=LIG4 PE=2 SV=2 Oryza sativa subsp. japonica identity=61.517; coverage=51.169; evalue=0.0; rank=2 OH-1004 Swiss-Prot homology; source_gene=LXL04_017960; source_db=UniProt Swiss-Prot current_release 2026-06-10 OH1004 OH1004 LXL04_017960 False LXL04_017960 LXL04_017960 reference_gene_literature At5g57160 DNA 连接酶参与 DNA 非同源末端连接。 Arabidopsis The Arabidopsis AtLIG4 gene is required for the repair of DNA damage, but not for the integration of Agrobacterium T-DNA.; PMID=12853643; DOI=10.1093/nar/gkg458 https://pubmed.ncbi.nlm.nih.gov/12853643/ LXL04_017960 LXL04_017960 reference_gene_function Os04g0606450 DNA 连接酶参与 DNA 非同源末端连接 (NHEJ)；双链断裂 (DSB) 修复所需。 Rice 暂无已核实直接文献