Orthology / Synteny Evidence
Inspect cross-reference orthology and synteny-block evidence.
Evidence boundary: TK1151 and OH-1004 are different materials of the same species. This page shows ortholog and synteny ID correspondence between two reference genomes, not a same-cultivar genome-version upgrade. Blocks are based on DIAMOND RBH plus coordinate-order anchors and can be further refined by MCScanX/JCVI. JCVI_TKOH_ block IDs are also accepted.
Global Block Summary
Synteny blocks
427
ID converter records
84884
High confidence
302
Medium confidence
125
| Material | Assembly | Genes | Gap runs | Telomere scan |
|---|---|---|---|---|
| TK1151 | TK1151_GWHBCHF00000000 |
45224 | 1917 | 0/9 |
| OH-1004 | OH1004_GCA_047496595.1 |
40057 | 131 | 0/711 |
Query Interpretation
Input ID
JCVI_TKOH_00373
Query type
Block ID
Crosswalk plus synteny evidence
Resolved gene
None
No rubber dandelion gene was resolved
Linked evidence
0 / 1 / 12
crosswalk / blocks / anchors
Best block:
JCVI_TKOH_00373The query resolves to a synteny-block ID. Block span and anchor genes are shown first.
Linear Synteny View
The best synteny block for the current query is shown as a linear ribbon.
High
Medium
Other
Only the first 12 anchors are drawn
The anchor table is paginated; TSV contains all anchors for the current query. The ribbon shows only a partial linear backbone of the current block.
Current Query Evidence
No ID correspondence record is available for the current query.
Synteny Evidence
| Block | Query location | Target location | Orientation | Current mapped anchors | Confidence | Note |
|---|---|---|---|---|---|---|
JCVI_TKOH_00373 |
ChrUn:11460753-11719325 | Chr01:68825391-69249707 | mixed | 12 | High | Formal JCVI synteny block from rebuilt ID map pipeline. |
Block Anchor Genes
Total anchors: 12 · Showing 1–12 · Page 1/1
| TK1151 gene | OH-1004 gene | Block | Identity | Coverage | Confidence |
|---|---|---|---|---|---|
TkAUNG041190 | LXL04_003147 | JCVI_TKOH_00373 | 100.0 | 87.619 / 41.256 | Review |
TkAUNG041210 | LXL04_003148 | JCVI_TKOH_00373 | 96.2 | 97.706 / 81.765 | Strict |
TkAUNG041430 | LXL04_003144 | JCVI_TKOH_00373 | 99.1 | 100.0 / 100.0 | Complex |
TkAUNG041440 | LXL04_003143 | JCVI_TKOH_00373 | 99.6 | 100.0 / 100.0 | Review |
TkAUNG041510 | LXL04_003142 | JCVI_TKOH_00373 | 96.8 | 99.367 / 55.282 | Review |
TkAUNG041530 | LXL04_003141 | JCVI_TKOH_00373 | 100.0 | 89.524 / 51.934 | Review |
TkAUNG041800 | LXL04_003135 | JCVI_TKOH_00373 | 93.8 | 100.0 / 100.0 | Complex |
TkAUNG041820 | LXL04_003133 | JCVI_TKOH_00373 | 99.3 | 99.32 / 58.871 | Review |
TkAUNG042010 | LXL04_003136 | JCVI_TKOH_00373 | 100.0 | 100.0 / 79.062 | Complex |
TkAUNG042050 | LXL04_003135 | JCVI_TKOH_00373 | 94.4 | 100.0 / 100.0 | Complex |
TkAUNG042070 | LXL04_003133 | JCVI_TKOH_00373 | 100.0 | 99.32 / 58.871 | Review |
TkAUNG042140 | LXL04_003131 | JCVI_TKOH_00373 | 100.0 | 100.0 / 100.0 | Strict |