同源/共线性证据

跨参考基因组查看同源关系与共线性区块证据。

证据边界:TK1151 和 OH-1004 是同一物种的不同材料,本页展示两个参考基因组之间的同源与共线性 ID 对照,不是同一品种/同一基因组版本升级。区块来自 DIAMOND RBH 与坐标顺序锚点,后续仍可用 MCScanX/JCVI 继续复核。也支持直接输入 JCVI_TKOH_ 开头的区块 ID。

全局区块概览

共线性区块
427
ID 对照记录
84884
高置信区块
302
中置信区块
125
参考材料组装基因数gap 数端粒扫描
TK1151 TK1151_GWHBCHF00000000 45224 1917 0/9
OH-1004 OH1004_GCA_047496595.1 40057 131 0/711

查询解析

输入 ID
JCVI_TKOH_00348
解析类型
区块 ID
ID 对照 + 共线性联合证据
解析到的基因
无
未能直接匹配到橡胶草基因目录
关联结果
0 / 1 / 33
对照 / 区块 / 锚点
最佳区块: JCVI_TKOH_00348

当前输入已解析为共线性区块 ID,下面优先展示区块范围和锚点基因。

线性共线性图

当前查询的最佳共线性区块以线性 ribbon 形式展示。

JCVI_TKOH_00348 Chr08 40514008-41341900 Chr07 17712057-18574642 mixed High 33 anchors
Chr08 40514008-41341900 Chr07 17712057-18574642 JCVI_TKOH_00348 · 33 gene pairs TkA08G155140 | LXL04_032203 | 100.0% | RBH_high_identity_coverage_synteny | Strict TkA08G155190 | LXL04_032201 | 100.0% | multi_source_to_OH1004 | Complex TkA08G155230 | LXL04_032199 | 96.3% | RBH_sequence_supported | Probable TkA08G155270 | LXL04_032197 | 95.4% | RBH_high_identity_coverage_synteny | Strict TkA08G155280 | LXL04_032196 | 98.7% | non_reciprocal_best_hit | Complex TkA08G155290 | LXL04_032195 | 93.2% | RBH_sequence_supported | Probable TkA08G155310 | LXL04_032194 | 98.2% | RBH_high_identity_coverage_synteny | Strict TkA08G155460 | LXL04_032191 | 98.9% | non_reciprocal_best_hit | Complex TkA08G155470 | LXL04_032191 | 96.7% | sequence_supported_annotation_or_model_conflict | Review TkA08G155490 | LXL04_032191 | 75.4% | non_reciprocal_best_hit | Complex TkA08G155500 | LXL04_032190 | 82.8% | non_reciprocal_best_hit | Complex TkA08G156170 | LXL04_032186 | 99.0% | sequence_supported_annotation_or_model_conflict | Review
High Medium Other 仅绘制前 12 条锚点
锚点表按页展示,TSV 下载包含当前查询的全部锚点;上方 ribbon 仅展示当前区块的部分线性共线性骨架。

当前查询证据

当前查询没有可展示的 ID 对照记录。

共线性证据

区块查询位置目标位置方向当前映射锚点数置信等级备注
JCVI_TKOH_00348 Chr08:40514008-41341900 Chr07:17712057-18574642 mixed 33 高置信 Formal JCVI synteny block from rebuilt ID map pipeline.

区块锚点基因

锚点总数: 33 · 当前范围 1–33 · 页码 1/1

TkA08G155140 → LXL04_032203
100.0%
TkA08G155190 → LXL04_032201
100.0%
TkA08G155230 → LXL04_032199
96.3%
TkA08G155270 → LXL04_032197
95.4%
TkA08G155280 → LXL04_032196
98.7%
TkA08G155290 → LXL04_032195
93.2%
TkA08G155310 → LXL04_032194
98.2%
TkA08G155460 → LXL04_032191
98.9%
TkA08G155470 → LXL04_032191
96.7%
TkA08G155490 → LXL04_032191
75.4%
TkA08G155500 → LXL04_032190
82.8%
TkA08G156170 → LXL04_032186
99.0%
TK1151 基因OH-1004 基因区块一致性覆盖度置信等级
TkA08G155140LXL04_032203JCVI_TKOH_00348100.0100.0 / 100.0Strict
TkA08G155190LXL04_032201JCVI_TKOH_00348100.0100.0 / 100.0Complex
TkA08G155230LXL04_032199JCVI_TKOH_0034896.398.956 / 74.899Probable
TkA08G155270LXL04_032197JCVI_TKOH_0034895.4100.0 / 100.0Strict
TkA08G155280LXL04_032196JCVI_TKOH_0034898.766.957 / 27.599Complex
TkA08G155290LXL04_032195JCVI_TKOH_0034893.2100.0 / 100.0Probable
TkA08G155310LXL04_032194JCVI_TKOH_0034898.298.049 / 92.769Strict
TkA08G155460LXL04_032191JCVI_TKOH_0034898.972.981 / 23.33Complex
TkA08G155470LXL04_032191JCVI_TKOH_0034896.799.577 / 42.921待复核
TkA08G155490LXL04_032191JCVI_TKOH_0034875.498.78 / 14.248Complex
TkA08G155500LXL04_032190JCVI_TKOH_0034882.8100.0 / 48.052Complex
TkA08G156170LXL04_032186JCVI_TKOH_0034899.0100.0 / 100.0待复核
TkA08G156180LXL04_032187JCVI_TKOH_0034899.8100.0 / 100.0Complex
TkA08G156820LXL04_032187JCVI_TKOH_00348100.092.898 / 60.444Complex
TkA08G158030LXL04_032183JCVI_TKOH_0034899.6100.0 / 100.0Strict
TkA08G158040LXL04_032182JCVI_TKOH_00348100.0100.0 / 100.0Complex
TkA08G158060LXL04_032181JCVI_TKOH_0034895.193.252 / 99.01Strict
TkA08G158150LXL04_032180JCVI_TKOH_0034897.898.358 / 94.052待复核
TkA08G158160LXL04_032175JCVI_TKOH_0034896.499.412 / 11.575待复核
TkA08G158290LXL04_032178JCVI_TKOH_0034899.4100.0 / 100.0Complex
TkA08G158380LXL04_032177JCVI_TKOH_0034891.0100.0 / 93.778Probable
TkA08G158400LXL04_032176JCVI_TKOH_0034896.593.281 / 100.0Complex
TkA08G158410LXL04_032175JCVI_TKOH_0034899.797.706 / 64.178Complex
TkA08G158420LXL04_032174JCVI_TKOH_00348100.0100.0 / 100.0Complex
TkA08G158470LXL04_032173JCVI_TKOH_0034898.8100.0 / 100.0Strict
TkA08G158480LXL04_032172JCVI_TKOH_00348100.0100.0 / 96.552待复核
TkA08G158510LXL04_032171JCVI_TKOH_00348100.094.737 / 29.439待复核
TkA08G158520LXL04_032170JCVI_TKOH_00348100.0100.0 / 90.023Complex
TkA08G158530LXL04_032169JCVI_TKOH_0034899.0100.0 / 100.0Strict
TkA08G158620LXL04_032168JCVI_TKOH_0034895.0100.0 / 100.0Strict
TkA08G158700LXL04_032167JCVI_TKOH_00348100.0100.0 / 91.489Strict
TkA08G158730LXL04_032166JCVI_TKOH_0034898.299.407 / 44.226待复核
TkA08G158800LXL04_032164JCVI_TKOH_0034899.098.98 / 88.342Strict