Orthology / Synteny Evidence
Inspect cross-reference orthology and synteny-block evidence.
Evidence boundary: TK1151 and OH-1004 are different materials of the same species. This page shows ortholog and synteny ID correspondence between two reference genomes, not a same-cultivar genome-version upgrade. Blocks are based on DIAMOND RBH plus coordinate-order anchors and can be further refined by MCScanX/JCVI. JCVI_TKOH_ block IDs are also accepted.
Global Block Summary
Synteny blocks
427
ID converter records
84884
High confidence
302
Medium confidence
125
| Material | Assembly | Genes | Gap runs | Telomere scan |
|---|---|---|---|---|
| TK1151 | TK1151_GWHBCHF00000000 |
45224 | 1917 | 0/9 |
| OH-1004 | OH1004_GCA_047496595.1 |
40057 | 131 | 0/711 |
Query Interpretation
Input ID
JCVI_TKOH_00085
Query type
Block ID
Crosswalk plus synteny evidence
Resolved gene
None
No rubber dandelion gene was resolved
Linked evidence
0 / 1 / 18
crosswalk / blocks / anchors
Best block:
JCVI_TKOH_00085The query resolves to a synteny-block ID. Block span and anchor genes are shown first.
Linear Synteny View
The best synteny block for the current query is shown as a linear ribbon.
High
Medium
Other
Only the first 12 anchors are drawn
The anchor table is paginated; TSV contains all anchors for the current query. The ribbon shows only a partial linear backbone of the current block.
Current Query Evidence
No ID correspondence record is available for the current query.
Synteny Evidence
| Block | Query location | Target location | Orientation | Current mapped anchors | Confidence | Note |
|---|---|---|---|---|---|---|
JCVI_TKOH_00085 |
Chr02:57556407-64826088 | Chr03:91106426-98697462 | mixed | 18 | High | Formal JCVI synteny block from rebuilt ID map pipeline. |
Block Anchor Genes
Total anchors: 18 · Showing 1–18 · Page 1/1
| TK1151 gene | OH-1004 gene | Block | Identity | Coverage | Confidence |
|---|---|---|---|---|---|
TkA02G222630 | LXL04_015840 | JCVI_TKOH_00085 | 97.1 | 20.178 / 80.952 | Review |
TkA02G223120 | LXL04_015847 | JCVI_TKOH_00085 | 100.0 | 100.0 / 100.0 | Complex |
TkA02G223680 | LXL04_015848 | JCVI_TKOH_00085 | 96.2 | 99.367 / 45.906 | Review |
TkA02G226740 | LXL04_015861 | JCVI_TKOH_00085 | 100.0 | 100.0 / 100.0 | Strict |
TkA02G228730 | LXL04_015865 | JCVI_TKOH_00085 | 97.5 | 96.034 / 100.0 | Strict |
TkA02G231510 | LXL04_015878 | JCVI_TKOH_00085 | 98.4 | 100.0 / 100.0 | Strict |
TkA02G232200 | LXL04_015879 | JCVI_TKOH_00085 | 99.6 | 100.0 / 100.0 | Complex |
TkA02G232460 | LXL04_015881 | JCVI_TKOH_00085 | 91.2 | 100.0 / 62.1 | Complex |
TkA02G234310 | LXL04_015884 | JCVI_TKOH_00085 | 97.3 | 100.0 / 55.952 | Review |
TkA02G234870 | LXL04_015884 | JCVI_TKOH_00085 | 97.9 | 100.0 / 55.952 | Review |
TkA02G239030 | LXL04_015888 | JCVI_TKOH_00085 | 100.0 | 94.235 / 69.901 | Complex |
TkA02G240600 | LXL04_015904 | JCVI_TKOH_00085 | 98.1 | 100.0 / 100.0 | Strict |
TkA02G241940 | LXL04_015905 | JCVI_TKOH_00085 | 98.5 | 100.0 / 93.885 | Strict |
TkA02G243100 | LXL04_015905 | JCVI_TKOH_00085 | 99.2 | 75.904 / 22.662 | Complex |
TkA02G244960 | LXL04_015917 | JCVI_TKOH_00085 | 99.2 | 100.0 / 100.0 | Strict |
TkA02G246820 | LXL04_015920 | JCVI_TKOH_00085 | 92.8 | 100.0 / 100.0 | Complex |
TkA02G252530 | LXL04_015924 | JCVI_TKOH_00085 | 97.9 | 100.0 / 100.0 | Strict |
TkA02G253260 | LXL04_015928 | JCVI_TKOH_00085 | 100.0 | 80.203 / 100.0 | Strict |