同源/共线性证据

跨参考基因组查看同源关系与共线性区块证据。

证据边界:TK1151 和 OH-1004 是同一物种的不同材料,本页展示两个参考基因组之间的同源与共线性 ID 对照,不是同一品种/同一基因组版本升级。区块来自 DIAMOND RBH 与坐标顺序锚点,后续仍可用 MCScanX/JCVI 继续复核。也支持直接输入 JCVI_TKOH_ 开头的区块 ID。

全局区块概览

共线性区块
427
ID 对照记录
84884
高置信区块
302
中置信区块
125
参考材料组装基因数gap 数端粒扫描
TK1151 TK1151_GWHBCHF00000000 45224 1917 0/9
OH-1004 OH1004_GCA_047496595.1 40057 131 0/711

查询解析

输入 ID
JCVI_TKOH_00359
解析类型
区块 ID
ID 对照 + 共线性联合证据
解析到的基因
无
未能直接匹配到橡胶草基因目录
关联结果
0 / 1 / 19
对照 / 区块 / 锚点
最佳区块: JCVI_TKOH_00359

当前输入已解析为共线性区块 ID,下面优先展示区块范围和锚点基因。

线性共线性图

当前查询的最佳共线性区块以线性 ribbon 形式展示。

JCVI_TKOH_00359 Chr08 98732794-101131702 Chr07 99730115-102423712 mixed High 19 anchors
Chr08 98732794-101131702 Chr07 99730115-102423712 JCVI_TKOH_00359 · 19 gene pairs TkA08G387220 | LXL04_034477 | 98.1% | sequence_supported_annotation_or_model_conflict | Review TkA08G388570 | LXL04_034470 | 97.1% | RBH_below_probable_coverage_or_synteny_threshold | Review TkA08G388930 | LXL04_034467 | 86.8% | non_reciprocal_best_hit | Complex TkA08G389960 | LXL04_034461 | 97.9% | RBH_below_probable_coverage_or_synteny_threshold | Review TkA08G390130 | LXL04_034460 | 93.3% | multi_source_to_OH1004 | Complex TkA08G390140 | LXL04_034459 | 94.0% | RBH_sequence_supported | Probable TkA08G390150 | LXL04_034458 | 98.3% | multi_source_to_OH1004 | Complex TkA08G390610 | LXL04_034457 | 97.1% | multi_source_to_OH1004 | Complex TkA08G390690 | LXL04_034456 | 97.5% | sequence_supported_annotation_or_model_conflict | Review TkA08G392370 | LXL04_034453 | 100.0% | non_reciprocal_best_hit | Complex TkA08G392480 | LXL04_034450 | 98.3% | sequence_supported_annotation_or_model_conflict | Review TkA08G392490 | LXL04_034450 | 98.0% | sequence_supported_annotation_or_model_conflict | Review
High Medium Other 仅绘制前 12 条锚点
锚点表按页展示,TSV 下载包含当前查询的全部锚点;上方 ribbon 仅展示当前区块的部分线性共线性骨架。

当前查询证据

当前查询没有可展示的 ID 对照记录。

共线性证据

区块查询位置目标位置方向当前映射锚点数置信等级备注
JCVI_TKOH_00359 Chr08:98732794-101131702 Chr07:99730115-102423712 mixed 19 高置信 Formal JCVI synteny block from rebuilt ID map pipeline.

区块锚点基因

锚点总数: 19 · 当前范围 1–19 · 页码 1/1

TkA08G387220 → LXL04_034477
98.1%
TkA08G388570 → LXL04_034470
97.1%
TkA08G388930 → LXL04_034467
86.8%
TkA08G389960 → LXL04_034461
97.9%
TkA08G390130 → LXL04_034460
93.3%
TkA08G390140 → LXL04_034459
94.0%
TkA08G390150 → LXL04_034458
98.3%
TkA08G390610 → LXL04_034457
97.1%
TkA08G390690 → LXL04_034456
97.5%
TkA08G392370 → LXL04_034453
100.0%
TkA08G392480 → LXL04_034450
98.3%
TkA08G392490 → LXL04_034450
98.0%
TK1151 基因OH-1004 基因区块一致性覆盖度置信等级
TkA08G387220LXL04_034477JCVI_TKOH_0035998.1100.0 / 100.0待复核
TkA08G388570LXL04_034470JCVI_TKOH_0035997.165.397 / 75.458待复核
TkA08G388930LXL04_034467JCVI_TKOH_0035986.846.667 / 12.391Complex
TkA08G389960LXL04_034461JCVI_TKOH_0035997.966.901 / 100.0待复核
TkA08G390130LXL04_034460JCVI_TKOH_0035993.3100.0 / 94.471Complex
TkA08G390140LXL04_034459JCVI_TKOH_0035994.082.47 / 94.372Probable
TkA08G390150LXL04_034458JCVI_TKOH_0035998.3100.0 / 100.0Complex
TkA08G390610LXL04_034457JCVI_TKOH_0035997.1100.0 / 100.0Complex
TkA08G390690LXL04_034456JCVI_TKOH_0035997.599.571 / 90.44待复核
TkA08G392370LXL04_034453JCVI_TKOH_00359100.097.414 / 91.87Complex
TkA08G392480LXL04_034450JCVI_TKOH_0035998.387.358 / 27.245待复核
TkA08G392490LXL04_034450JCVI_TKOH_0035998.0100.0 / 7.748待复核
TkA08G393150LXL04_034447JCVI_TKOH_0035982.1100.0 / 90.604待复核
TkA08G393400LXL04_034446JCVI_TKOH_0035997.4100.0 / 85.789Strict
TkA08G394030LXL04_034443JCVI_TKOH_0035994.495.062 / 88.846Probable
TkA08G394830LXL04_034429JCVI_TKOH_0035995.9100.0 / 100.0Strict
TkA08G394860LXL04_034428JCVI_TKOH_0035997.691.367 / 64.467Complex
TkA08G394890LXL04_034427JCVI_TKOH_0035999.5100.0 / 98.933Complex
TkA08G394930LXL04_034425JCVI_TKOH_0035994.7100.0 / 100.0Probable